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Table 3 Predicted peptide-binding motifs for HLA class I alleles without sufficient binding data to make direct predictions.

From: A geometric and algebraic view of MHC-peptide complexes and their binding properties

Pp Paa A23 A26 A32 A34 A36 A43 A66 A68 A69 A74 B62 B75 B72 B63 B37 B61 B41 B46 B48 B49 B50 B52 B55 B57 B58 859 B67 B73 B78 B81
1 A   0.3 0.3 0.3 0.3 0.3 0.3 8.3 0.3 0.3     0.3           0.3 0.3      
1 F   0.3   0.3    0.3 0.3 0.3   0.3 0.3 0.3 0.3   0.3 0.3 0.3 0.3    0.3 0-3 0.3 0.3 0.3 0,3 0,3 0,3 0,3
1 R 0.3 0.3 0.3 0.3   0.3 0.3    0.3 0.3 0.3 0.4 0.3 0.3 0.3 0.3 0.3 0.4 0.3 0.3 0,3 04 0.3 0.3 0.4 0.4 0.5 0.3 0.4
2 E       0.5      0.7 0.7 0.7   0.7 0.7 0.7   0.7 0.7 0.7 0.7         
2 F 0.3                              
2 I 0.3 0.3 0.3 0.3 0.3 0.3 0.3 0.3 0.3 0.3     0.3     0.3       0.3 0.3    0.3   
2 L 0.5 0.5 0.5 0.5 0.5 0.5 0.5 0.5 0.5 0.5 0.5 0.5 0.5 0.5 0.5 0.4 0.5 0.5 0.4 0.5 0.5 0.3 0.3 0.5 0.5 0.3 0.5 0.5 0.3 0.4
2 P 0.5 0.8 0.5 0.8 0.3 0.5 0.8 0.8 0.8 0.5 0.8 0.8 0.8 0.8 0.7 0.8 0.8 0.8 0.8 0.6 0.6 0.8 0.8 0.8 0,8 0.8 0.8 0.8 0.8 0.8
2 R 0.4 0.4 0.4 0,4   0.4 0,4    0.4 0.5 0.5 0.7 0.5 0.5 0.5 0.5 0.5 0.7 0.5 0.5 0.5 07 0.5 0.5 0.7 0.7 0.9 0.5 07
2 T   03 0.3   0.3 0.3 0.3 0.3 0.3 0.3     0.3           0.3 0.3      
2 V 0.3 0.3 0.3 0.3 0.3 0.3 0.3 0.3 0.3 0.3     0.3     0.3      0.3 0.3 0.3   0.3 0.3 0.3 0.3
2 Y 0.7   0.5      0.5   0.5                     
3 D   0.3    0.4 0.3         0.4           0.4 0.4      
3 F   0.3 0.3   0.3 0.3 0.3 0.3 0.3 0.3     0.3           0,3 0.3      
3 K                0.3   0.3              
3 R      0.3            0.4 0.4 0.3 0.4     0.3     0.3    0.4
3 Y 0.3 0.3 0.3 0.3   0.3 0.3    0.3 0.3 0.3 04 0.3 0.3 0.3 0.3 0.3 0.4 0.3 0.3 0.3 0,4 0.3 0.3 0.4 0.4 0.5 0.3 0.4
3 I   0.3   0.3    0.3 0.3 0.3   0.3 0.3 0.3 0.3 0.3 0.3 0.3 0.3 0.3 0.3 0.3 0.4 0.4 0.3 0.3 0.4 0.3 0.4 0.4 0.3
3 K 0.4 0.5 0.5 0.4 0.5 0.5 0.5 0.5 0.5 0.5     0.5     0.4      0.4 0.5 0.5   04 0.4 0.4 0.4
9 L 0.3 0.3 0.3 0.3   0.3 0.3   0.3 0.3 0.3 0.3 0.3 0.3 0.3 0.3 0.3 0.3 0.3 0.3 03 0.3 0.3 0.3 0.3 0.3 0.3 0.3 0.3 0.3
9 R 0.3 0.3 0.3   0.3 0.3 0.3 0.3 0.3 0.3     0.3           0.3 0.3      
8 V 0.4 0.4 0.4 0.4 0.4 0.4 0.4 0.3 0.4 0.4 0.4 0.4 0.4 0.4 0.4   0.4 0.4   0.4 0.4    0.3 0.4   0.4 0.3   
9 Y 0.3 0.6 0.4 0.3 0.6 0.6 0.4 0.4 0.4 0.4     0.6     0.3      0.3 0.6 0.6   0.3 0.3 0.3 0.3
  1. Peptide-binding motifs are based on allele vectors in space Y. Only values for the Ochiai similarity index equal or greater than 0.3 are included. 'Pp' stands for amino acid position in peptide and 'Paa' for the amino acid occupying that position.