Skip to main content

Table 1 Crystallographic data

From: Active site plasticity revealed from the structure of the enterobacterial N-ribohydrolase RihA bound to a competitive inhibitor

Data collection

  

Resolution range (Å)

37.5-2.1

2.21-2.1

Number of observed reflections

232,754

31,773

Number of unique reflections

68,457

9,929

Completeness (%)

97.2

95.4

Multiplicity

3.4

3.2

Mean I/σ(I)

8.1

3.0

Rsym

0.122

0.388

Refinement

  

Resolution range (Å)

37.50-2.1

2.15-2.1

Number of reflections (F > 0)

65,238

4,760

Rcrys

0.203

0.254

Rfree

0.241

0.304

rmsd bonds (Å)

0.020

 

rmsd angles (°)

1.689

 

Mean B factor (Å2)

30.3

 

Model quality

  

Residues in favored regions of Ramachandran plot (%)

97.8

 

Residues outliers in Ramachandran plot (%)

0.5

 

Unusual rotamers (%)

0.9

 
  1. Data collection and refinement statistics for the RihA-DAPIR complex.
  2. Rsym = ∑ hkl i||Ii(hkl)|-|<I(hkl)||>|/∑hkli|Ii(hkl)|, where Ii(hkl) is the ith measurement of reflection hkl, and <I(hkl)> is the average value from the individual measurements
  3. Rcrys = ∑ hkl ||Fo(hkl)|-|Fc(hkl)||/∑ hkl |Fo(hkl)|, where Fo(hkl) and Fc(hkl) are the measured and calculated structure factor of reflection hkl, respectively
  4. Rfree, same as Rcrys, but calculated on a subset of randomly-selected reflection excluded from all stages refinement (3,455 total, 265 in the highest resolution shell).