Identification of recurring protein structure microenvironments and discovery of novel functional sites around CYS residues

Table 1 Test clusters for evaluating functional coherence

We tested the functional coherence measure using clusters associated with six functional motifs from PROSITE. The minimum number of proteins is the smallest cluster size we used for that particular PROSITE pattern, derived from training sets from existing FEATURE models. The maximum number is the total number of proteins in Swiss-Prot annotated to that pattern.

ISSN: 1472-6807