Figure 5

Contact map and predicted long-range contacts for protein chain PDB:1sjwA. (a) The comparison of contact map and predicted contacts when the top 2L predictions are selected; (b), (c), (d), (e) and (f) illustrate the similar comparisons when the top L, L/2, L/5, L/10 and L/20 predictions are selected, respectively. In addition, subgraph (g) visualizes the natural 3D structure of protein chain PDB:1sjwA. The blue square denotes the actual long-range contact and the red square indicates the predicted contact.