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Table 7 The mean and standard deviation values (in parentheses) for each parameter quantifying curvature, calculated for all successive, overlapping 36-mer fragments (excluding the terminal basepairs) in each individual structure.

From: An ensemble of B-DNA dinucleotide geometries lead to characteristic nucleosomal DNA structure and provide plasticity required for gene expression

PDB id d/l local I max /I min I m a x + I m i d I m i n ROC (Å)
1KX4 0.707 (0.018) 5.9 (0.5) 11.1 (1.1) 41.9 (2.0)
2NZD 0.707 (0.020) 5.8 (0.5) 11.0 (1.0) 41.8 (2.0)
1U35 0.710 (0.017) 5.9 (0.5) 11.1 (1.1) 42.0 (1.9)
2F8N 0.714 (0.017) 5.9 (0.5) 11.1 (1.1) 41.9 (2.0)
1AOI 0.710 (0.019) 5.9 (0.5) 11.0 (1.0) 42.0 (2.0)
1KX3 0.707 (0.020) 5.9 (0.5) 11.0 (1.0) 41.7 (2.0)
2CV5 0.708 (0.017) 5.9 (0.5) 11.1 (1.0) 41.9 (1.9)
1EQZ 0.712 (0.018) 5.9 (0.5) 11.1 (1.0) 41.8 (2.0)
1F66 0.708 (0.016) 5.8 (0.5) 11.0 (1.0) 41.9 (2.1)
1M18 0.713 (0.017) 5.9 (0.5) 11.1 (1.0) 42.2 (2.0)
1M19 0.716 (0.017) 6.0 (0.5) 11.2 (1.1) 42.0 (1.9)
1M1A 0.712 (0.017) 5.9 (0.5) 11.1 (1.0) 42.0 (1.8)
1P34 0.708 (0.019) 5.9 (0.5) 11.1 (1.1) 42.0 (2.1)
1P3A 0.708 (0.019) 5.9 (0.5) 11.0 (1.0) 41.9 (2.0)
1P3B 0.710 (0.019) 5.9 (0.5) 11.1 (1.0) 41.8 (2.0)
1P3F 0.710 (0.019) 5.9 (0.5) 11.1 (1.0) 41.8 (2.0)
1P3G 0.709 (0.019) 5.9 (0.5) 11.1 (1.0) 42.0 (2.0)
1P3I 0.708 (0.019) 5.9 (0.5) 11.1 (1.0) 41.9 (2.0)
1P3K 0.705 (0.020) 5.9 (0.5) 11.0 (1.0) 41.9 (2.0)
1P3L 0.710 (0.019) 5.9 (0.5) 11.1 (1.0) 42.0 (2.0)
1P3M 0.711 (0.020) 5.9 (0.5) 11.1 (1.0) 42.0 (2.0)
1P3O 0.708 (0.020) 5.9 (0.5) 11.0 (1.0) 41.9 (2.0)
1P3P 0.709 (0.019) 5.9 (0.5) 11.1 (1.0) 41.9 (2.0)
1S32 0.709 (0.019) 5.9 (0.4) 11.0 (0.9) 41.9 (1.9)
1ZLA 0.708 (0.019) 5.9 (0.5) 11.0 (1.0) 41.8 (2.0)
2NQB 0.708 (0.020) 5.8 (0.5) 11.0 (1.1) 41.9 (2.1)
3C1B 0.706 (0.019) 5.9 (0.5) 11.1 (1.0) 42.0 (2.0)
1KX5 0.714 (0.018) 6.0 (0.6) 11.2 (1.1) 41.9 (2.0)
2PYO 0.712 (0.019) 5.9 (0.6) 11.2 (1.1) 41.9 (2.1)