Table 2 Pairwise structural alignment of evolutionarily related thermophilic and mesophilic protein pairs for (α/β)8, β-jelly roll, and (α/α)6 folds
| Â | Â | Â | Â | Â | Protein length | Â | Â | |
|---|---|---|---|---|---|---|---|---|
Fold | Thermophile | Mesophile | RMSD (Ã…) | Z-score | Thermophile | Mesophile | Sequence identity (%) | Aligned/Gap |
(α/β) 8 | Clostridium thermocellum (pdb id: 2e4t) | Clostridium acetobutylicum (pdb id: 3ik2) | 0.9 | 8.3 | 509 | 512 | 60.6 | 507/4 |
β-jelly roll | Rhodotermus marinus (pdb id: 2bw8) | Streptomyces lividans (pdb id: 2nlr) | 1.2 | 7.2 | 227 | 234 | 33.3 | 219/9 |
(α/α) 6 | Clostridium thermocellum (pdb id: 1l1y) | Clostridium cellulolyticum (pdb id: 1g9g) | 0.8 | 8.3 | 678 | 629 | 61.6 | 612/33 |