Table 2 TlyA subcellular localization prediction through 9 available servers for prokaryotic proteins
Tool | Subcellular localization | Value | Reliability Index | Method | Overall prediction accuracy | Ref. |
|---|---|---|---|---|---|---|
TBpred | Cytoplasmic | 1.365 | Higher value above 0 or 1 | SVM/PSSM, MEME/MAST, HM. | 82.51, 80.39 and 86.62% | 24 |
Gpos-PLoc | Cytoplasmic | ND | ND | By fusing PseAAC | > 80% | 25 |
PSORTb | Cytoplasmic | 8.870 | ≥ 7.5 | SCL-BLAST, SVM, Motif and Profile Analysis | 96% | 26 |
CELLO | Cytoplasmic | 3.809 | Higher value | SVM based on multiple n-peptide composition | 89% | 27 |
LOCtree | Cytoplasmic | 8.000 | >3 | SVM | ND | 28 |
SubLoc v1.0 | Cytoplasmic | 5.000 | 5 | SVM | 96% | 29 |
PA-SUB | Extracellular | 72.84% | Higher percent | SVM | > 92% | 30 |
MemType-2L | Non membrane protein | ND | ND | Pse-PSSM | 92.7 | 31 |
TMBETA-SVM | Non membrane protein | 0.636 | ND | SVM | 92% | 32 |