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Table 1 Clustering result of the unbound form

From: Dynamical Basis for Drug Resistance of HIV-1 Protease

Scaffold

11 12 13 14 15 16 17 18 19 20 21 22 32 33 34 35 36 37 38 39 40 41 42 43 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 77 79 80 81 82 83

N-terminal

1 2 3 4 5 6 7 8 9

C-terminal

96 97 98 99

Coupled with the active site

10 23 24 25 26 27 28 29 30 31 84 85 86 87 88 89 90 91 92 93 94 95

Coupled with the flap region

44 45 46 47 48 49 50 51 52 53 54 55 56 57 76 78

  1. Residues of the active site and of the flap are underlined and double-underlined, respectively.