Table 1 DS-QMnpp for HLA-DP2 binding prediction.
From: Peptide binding prediction for the human class II MHC allele HLA-DP2: a molecular docking approach
| Â | p1 | p2 | p3 | p4 | p5 | p6 | p7 | p8 | p9 |
|---|---|---|---|---|---|---|---|---|---|
Ala | -0.101 | 0.068 | 0.040 | 0.000 | 0.049 | -0.079 | -0.089 | 0.189 | 0.102 |
Arg | 0.036 | -0.017 | 0.030 | 0.411 | 0.445 | 0.073 | 0.379 | -0.031 | -0.753 |
Asn | -0.046 | 0.011 | -0.122 | 0.009 | -0.116 | 0.090 | -0.037 | -0.007 | 0.148 |
Asp | -0.263 | -0.071 | -0.493 | -0.237 | -0.403 | -0.458 | -0.408 | -0.287 | -0.167 |
Cys | -0.065 | 0.002 | -0.173 | -0.076 | -0.146 | -0.076 | -0.081 | -0.027 | 0.169 |
Gln | 0.027 | -0.003 | -0.163 | 0.053 | -0.048 | 0.086 | 0.006 | -0.139 | 0.146 |
Glu | -0.208 | -0.045 | -0.559 | -0.169 | -0.417 | -0.383 | -0.380 | -0.379 | -0.124 |
Gly | -0.202 | 0.004 | -0.143 | -0.035 | 0.016 | -0.187 | -0.150 | 0.149 | 0.007 |
His | 0.150 | 0.179 | 0.015 | 0.002 | -0.018 | 0.235 | -0.055 | -0.027 | -0.132 |
Ile | 0.105 | 0.085 | -0.036 | -0.006 | -0.025 | 0.097 | 0.071 | 0.033 | -0.050 |
Leu | 0.130 | 0.056 | 0.111 | 0.113 | -0.021 | 0.107 | 0.167 | 0.081 | -0.044 |
Lys | -0.009 | -0.071 | -0.031 | 0.428 | 0.597 | 0.083 | 0.592 | -0.139 | 0.247 |
Met | 0.064 | 0.037 | -0.102 | 0.002 | -0.123 | 0.083 | -0.007 | -0.091 | 0.187 |
Phe | 0.469 | 0.101 | 0.269 | 0.070 | 0.043 | 0.542 | 0.050 | 0.177 | -10.000 |
Pro | -0.531 | -0.762 | 0.441 | -0.572 | 0.394 | -10.000 | -10.000 | 0.621 | -10.000 |
Ser | -0.202 | -0.019 | -0.143 | -0.090 | -0.157 | -0.194 | -0.206 | -0.071 | 0.074 |
Thr | -0.105 | 0.054 | 0.071 | -0.077 | -0.126 | -0.153 | -0.107 | -0.043 | 0.144 |
Trp | 0.375 | 0.238 | 0.375 | 0.084 | 0.093 | -0.302 | 0.238 | 0.041 | -10.000 |
Tyr | 0.324 | 0.054 | 0.395 | 0.093 | -0.038 | 0.411 | 0.056 | -0.187 | -10.000 |
Val | 0.052 | 0.099 | 0.218 | -0.003 | 0.002 | 0.026 | -0.039 | 0.137 | 0.047 |