Figure 4
From: Deciphering the shape and deformation of secondary structures through local conformation analysis
Deformation matrices. A) Matrix of deformation proportion P (sl1, sl2) at interface (see method) where sl1 is the letter in the unbound state (y-axis) and sl2 the corresponding letter in the bound state (x-axis). B) Matrix of deformation differences between the interface and the surface ΔP(sl1, sl2) (see method) where sl1 is the letter in the unbound state (y-axis) and sl2 the corresponding letter in the bound state (x-axis). For the two matrices, the black lines separate structural letters according to their secondary structure type. The structural letters are differentiated according to their compartment preferences (blue for core, red for surface, triangle for interface and square for non-interface). Dotted lines separated surface loop-letters from core ones.