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Table 1 This table shows the solvation energies calculated by DelPhi by placing the protein 1ACB on four objects each created by the Protein Nano-Object Integrator

From: Protein Nano-Object Integrator (ProNOI) for generating atomic style objects for molecular modeling

 

DelPhi (kT)

PNO (kT)

% Difference

Sphere

−27955.27626

−27960.97555

0.02

Cylinder

−27960.22117

−27948.76093

0.04

Cone

−27973.12424

−27959.91403

0.05

Cube

−27957.72562

−27959.3489

0.01

  1. The final column shows the percent difference value between the two object creation styles respective to each object type.
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BMC Structural Biology

ISSN: 1472-6807

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