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Table 1 Effect of mutations on the physicochemical properties of active sites

From: Exploring functionally related enzymes using radially distributed properties of active sites around the reacting points of bound ligands

UniProt

Ligand

RDF

SiteEngine

  

Euclidean

1 – cosine

100 – match score

  

w/w, m/m

w/m

w/w, m/m

w/m

w/w, m/m

w/m

CCPR_YEAST

HEM

198

195

0.0041

0.0041

30.7

24.5

CHOD_STRS0

FAD

222

358

0.0015

0.0039

51.9

59.4

FPRA_MYCTU

FAD

168

231

0.0039

0.0053

30.7

56.6

 

NDP/ODP

228

340

0.0073

0.0147

38.2

74.4

FRDA_SHEFN

FAD

219

605

0.0054

0.0400

14.1

13.2

G3P_BACST

NAD

131

164

0.0017

0.0023

23.1

26.9

IDH_ECOLI

NAP

370

369

0.0357

0.0312

19.5

55.8

MDH_ECOLI

NAD

322

385

0.0023

0.0133

29.5

32.2

NIA1_MAIZE

FAD

163

300

0.0037

0.0132

25.0

37.2

OYE1_SACPS

FMN

201

224

0.0051

0.0064

34.3

40.3

  1. The w/w and m/m columns show wild-type/wild-type or mutant/mutant pairs. The w/m columns show wild-type/mutant pairs. The results with statistically significant differences between the match and mismatch are shown in bold font. The statistical significance was assessed by Wilcoxon rank sum tests with a 5% significance level.