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Table 1 Sequence alignments in GPCR-ModSim indicate squid rhodopsin has the greatest identity to Tre1 + and Tre1 sctt

From: Molecular dynamics simulations on the Tre1 G protein-coupled receptor: exploring the role of the arginine of the NRY motif in Tre1 structure

Template Tre1 + Tre1 sctt
Total % identities Total % identities
1U19 – bovine rhodopsin 14.3 14.1
2RH1 – human β 2 -adrenergic receptor 15.1 14.6
2VT4 – turkey β 1 -adrenergic receptor 14.8 14.3
2Z73 – squid rhodopsin * 17.4 16.7
3EML – human A2A-adenosine receptor 14.0 13.5
3ODU – human chemokine receptor 4 16.3 14.8
3PBL – human D3 dopamine receptor 16.1 15.9
  1. * Denotes the template chosen for homology modeling.