Skip to main content

Advertisement

Table 3 Precision of the simulations with two modules

From: Defining structural and evolutionary modules in proteins: a community detection approach to explore sub-domain architecture

Sample Intra-cluster Intracorrelation quantiles Intercorrelation quantiles
Size correlation 0% 25% 50% 75% 100% 0% 25% 50% 75% 100%
  0.2 -0.12 0.112 0.178 0.247 0.532 -0.349 -0.061 0.009 0.081 0.357
  0.4 0.135 0.347 0.401 0.451 0.627 -0.372 -0.075 -0.014 0.049 0.314
100 0.6 0.405 0.581 0.617 0.653 0.758 -0.468 -0.225 -0.165 -0.104 0.116
0.8 0.716 0.776 0.795 0.813 0.879 -0.256 -0.087 -0.049 -0.011 0.147
  1.0 1.0 1.0 1.0 1.0 1.0 -0.018 -0.018 -0.018 -0.018 -0.018
  0.2 0.059 0.172 0.2 0.229 0.337 -0.177 -0.036 -0.008 0.023 0.151
  0.4 0.286 0.371 0.393 0.414 0.495 -0.099 0.013 0.04 0.066 0.183
500 0.6 0.516 0.587 0.602 0.618 0.67 -0.099 0.005 0.029 0.051 0.153
0.8 0.748 0.793 0.801 0.808 0.838 -0.069 0.014 0.031 0.05 0.131
  1.0 1.0 1.0 1.0 1.0 1.0 -0.012 -0.012 -0.012 -0.012 -0.012
  0.2 0.109 0.182 0.201 0.221 0.301 -0.116 -0.023 -0.001 0.021 0.128
  0.4 0.321 0.388 0.405 0.421 0.488 -0.133 -0.03 -0.011 0.008 0.089
1000 0.6 0.531 0.582 0.593 0.605 0.647 -0.077 -0.008 0.008 0.023 0.091
0.8 0.764 0.793 0.799 0.805 0.825 -0.052 0.007 0.021 0.034 0.082
  1.0 1.0 1.0 1.0 1.0 1.0 0.026 0.026 0.026 0.026 0.026
  1. Precision of the simulation of two modules with 100, 500 and 1000 samples. The quantiles describe the distribution of values in the lower triangle of the correlation matrix for the full simulated data set. The intercorrelation quantiles represent the distribution of the sub-matrix corresponding to the correlation between the two modules.