TY - JOUR AU - Klein, A. V. AU - Hambley, T. W. PY - 2009 DA - 2009// TI - Platinum drug distribution in cancer cells and tumors JO - Chem Rev VL - 109 UR - https://doi.org/10.1021/cr9001066 DO - 10.1021/cr9001066 ID - Klein2009 ER - TY - JOUR AU - Lovejoy, K. S. AU - Lippard, S. J. PY - 2009 DA - 2009// TI - Non-traditional platinum compounds for improved accumulation, oral bioavailability, and tumor targeting JO - Dalton Trans VL - 48 UR - https://doi.org/10.1039/b913896j DO - 10.1039/b913896j ID - Lovejoy2009 ER - TY - JOUR AU - Wheate, N. J. AU - Walker, S. AU - Craig, G. E. AU - Oun, R. PY - 2010 DA - 2010// TI - The status of platinum anticancer drugs in the clinic and in clinical trials JO - Dalton Trans VL - 39 UR - https://doi.org/10.1039/c0dt00292e DO - 10.1039/c0dt00292e ID - Wheate2010 ER - TY - JOUR AU - Wong, E. AU - Giandomenico, C. M. PY - 1999 DA - 1999// TI - ChemInform abstract: current status of platinum-based antitumor drugs JO - ChemInform VL - 30 UR - https://doi.org/10.1002/chin.199948303 DO - 10.1002/chin.199948303 ID - Wong1999 ER - TY - JOUR AU - Rodger, A. AU - Patel, K. K. AU - Sanders, K. J. AU - Datt, M. AU - Sacht, C. AU - Hannon, M. J. PY - 2002 DA - 2002// TI - Anti-tumour platinum acylthiourea complexes and their interactions with DNA JO - J Chem Soc Dalton Trans VL - 19 UR - https://doi.org/10.1039/b205056k DO - 10.1039/b205056k ID - Rodger2002 ER - TY - JOUR AU - Hannon, M. J. PY - 2007 DA - 2007// TI - Metal-based anticancer drugs: from a past anchored in platinum chemistry to a post-genomic future of diverse chemistry and biology JO - Pure Appl Chem VL - 79 UR - https://doi.org/10.1351/pac200779122243 DO - 10.1351/pac200779122243 ID - Hannon2007 ER - TY - JOUR AU - Kostova, I. PY - 2006 DA - 2006// TI - Platinum complexes as anticancer agents JO - Recent Pat Anticancer Drug Discov VL - 1 UR - https://doi.org/10.2174/157489206775246458 DO - 10.2174/157489206775246458 ID - Kostova2006 ER - TY - JOUR AU - Reedijk, J. PY - 2009 DA - 2009// TI - Platinum anticancer coordination compounds: study of dna binding inspires new drug design JO - Eur J Inorg Chem VL - 2009 UR - https://doi.org/10.1002/ejic.200900054 DO - 10.1002/ejic.200900054 ID - Reedijk2009 ER - TY - JOUR AU - Sherman, S. E. AU - Gibson, D. AU - Wang, A. AU - Lippard, S. J. PY - 1985 DA - 1985// TI - X-ray structure of the major adduct of the anticancer drug cisplatin with DNA: cis-[Pt (NH3) 2 (d (pGpG))] JO - Science (New York, NY) VL - 230 UR - https://doi.org/10.1126/science.4048939 DO - 10.1126/science.4048939 ID - Sherman1985 ER - TY - JOUR AU - Abu-Surrah, A. S. AU - Kettunen, M. PY - 2006 DA - 2006// TI - Platinum group antitumor chemistry: design and development of new anticancer drugs complementary to cisplatin JO - Curr Med Chem VL - 13 UR - https://doi.org/10.2174/092986706776872970 DO - 10.2174/092986706776872970 ID - Abu-Surrah2006 ER - TY - JOUR AU - Bruijnincx, P. C. AU - Sadler, P. J. PY - 2008 DA - 2008// TI - New trends for metal complexes with anticancer activity JO - Curr Opin Chem Biol VL - 12 UR - https://doi.org/10.1016/j.cbpa.2007.11.013 DO - 10.1016/j.cbpa.2007.11.013 ID - Bruijnincx2008 ER - TY - JOUR AU - Harper, B. W. AU - Krause-Heuer, A. M. AU - Grant, M. P. AU - Manohar, M. AU - Garbutcheon-Singh, K. B. AU - Aldrich-Wright, J. R. PY - 2010 DA - 2010// TI - Advances in platinum chemotherapeutics JO - Chemistry VL - 16 UR - https://doi.org/10.1002/chem.201000148 DO - 10.1002/chem.201000148 ID - Harper2010 ER - TY - JOUR AU - McWhinney, S. R. AU - Goldberg, R. M. AU - McLeod, H. L. PY - 2009 DA - 2009// TI - Platinum neurotoxicity pharmacogenetics JO - Mol Cancer Ther VL - 8 UR - https://doi.org/10.1158/1535-7163.MCT-08-0840 DO - 10.1158/1535-7163.MCT-08-0840 ID - McWhinney2009 ER - TY - JOUR AU - Kandala, P. K. AU - Srivastava, S. K. PY - 2012 DA - 2012// TI - Diindolylmethane suppresses ovarian cancer growth and potentiates the effect of cisplatin in tumor mouse model by targeting signal transducer and activator of transcription 3 (STAT3) JO - BMC Med VL - 10 UR - https://doi.org/10.1186/1741-7015-10-9 DO - 10.1186/1741-7015-10-9 ID - Kandala2012 ER - TY - JOUR AU - Zhang, J. AU - Wang, X. AU - Tu, C. AU - Lin, J. AU - Ding, J. AU - Lin, L. AU - Wang, Z. AU - He, C. AU - Yan, C. AU - You, X. PY - 2003 DA - 2003// TI - Monofunctional platinum complexes showing potent cytotoxicity against human liver carcinoma cell line BEL-7402 JO - J Med Chem VL - 46 UR - https://doi.org/10.1021/jm020593j DO - 10.1021/jm020593j ID - Zhang2003 ER - TY - JOUR AU - Sanchez-Cano, C. AU - Hannon, M. J. PY - 2009 DA - 2009// TI - Cytotoxicity, cellular localisation and biomolecular interaction of non-covalent metallo-intercalators with appended sex hormone steroid vectors JO - Dalton Trans VL - 48 UR - https://doi.org/10.1039/b912711a DO - 10.1039/b912711a ID - Sanchez-Cano2009 ER - TY - JOUR AU - Coll, M. AU - Frederick, C. A. AU - Wang, A. AU - Rich, A. PY - 1987 DA - 1987// TI - A bifurcated hydrogen-bonded conformation in the d (AT) base pairs of the DNA dodecamer d (CGCAAATTTGCG) and its complex with distamycin JO - Proc Natl Acad Sci VL - 84 UR - https://doi.org/10.1073/pnas.84.23.8385 DO - 10.1073/pnas.84.23.8385 ID - Coll1987 ER - TY - JOUR AU - Gessner, R. V. AU - Quigley, G. J. AU - Wang, A. H. J. AU - Van der Marel, G. A. AU - Van Boom, J. H. AU - Rich, A. PY - 1985 DA - 1985// TI - Structural basis for stabilization of Z-DNA by cobalt hexaammine and magnesium cations JO - Biochemistry VL - 24 UR - https://doi.org/10.1021/bi00323a001 DO - 10.1021/bi00323a001 ID - Gessner1985 ER - TY - JOUR AU - Łęczkowska, A. AU - Vilar, R. PY - 2012 DA - 2012// TI - Interaction of metal complexes with nucleic acids JO - Annu Rep Prog Chem Sect A: Inorg Chem VL - 108 UR - https://doi.org/10.1039/c2ic90016e DO - 10.1039/c2ic90016e ID - Łęczkowska2012 ER - TY - JOUR AU - Lipscomb, L. A. AU - Zhou, F. X. AU - Presnell, S. R. AU - Woo, R. J. AU - Peek, M. E. AU - Plaskon, R. R. AU - Williams, L. D. PY - 1996 DA - 1996// TI - Structure of a DNA-porphyrin complex JO - Biochemistry VL - 35 UR - https://doi.org/10.1021/bi952443z DO - 10.1021/bi952443z ID - Lipscomb1996 ER - TY - JOUR AU - Liu, H. K. AU - Sadler, P. J. PY - 2011 DA - 2011// TI - Metal complexes as DNA intercalators JO - Accounts Chem Res VL - 44 UR - https://doi.org/10.1021/ar100140e DO - 10.1021/ar100140e ID - Liu2011 ER - TY - JOUR AU - Nair, R. B. AU - Teng, E. S. AU - Kirkland, S. L. AU - Murphy, C. J. PY - 1998 DA - 1998// TI - Synthesis and DNA-binding properties of [Ru (NH3) 4dppz] 2+ JO - Inorg Chem VL - 37 UR - https://doi.org/10.1021/ic970432j DO - 10.1021/ic970432j ID - Nair1998 ER - TY - JOUR AU - Lovejoy, K. S. AU - Todd, R. C. AU - Zhang, S. AU - McCormick, M. S. AU - D’Aquino, J. A. AU - Reardon, J. T. AU - Sancar, A. AU - Giacomini, K. M. AU - Lippard, S. J. PY - 2008 DA - 2008// TI - cis-Diammine(pyridine)chloroplatinum(II), a monofunctional platinum(II) antitumor agent: uptake, structure, function, and prospects JO - Proc Natl Acad Sci USA VL - 105 UR - https://doi.org/10.1073/pnas.0803441105 DO - 10.1073/pnas.0803441105 ID - Lovejoy2008 ER - TY - JOUR AU - Gagnon, V. AU - St-Germain, M. E. AU - Descoteaux, C. AU - Provencher-Mandeville, J. AU - Parent, S. AU - Mandal, S. K. AU - Asselin, E. AU - Berube, G. PY - 2004 DA - 2004// TI - Biological evaluation of novel estrogen-platinum(II) hybrid molecules on uterine and ovarian cancers-molecular modeling studies JO - Bioorg Med Chem Lett VL - 14 UR - https://doi.org/10.1016/j.bmcl.2004.09.015 DO - 10.1016/j.bmcl.2004.09.015 ID - Gagnon2004 ER - TY - JOUR AU - Hannon, M. J. AU - Green, P. S. AU - Fisher, D. M. AU - Derrick, P. J. AU - Beck, J. L. AU - Watt, S. J. AU - Ralph, S. F. AU - Sheil, M. M. AU - Barker, P. R. AU - Alcock, N. W. PY - 2006 DA - 2006// TI - An estrogen-platinum terpyridine conjugate: DNA and protein binding and cellular delivery JO - Chemistry VL - 12 UR - https://doi.org/10.1002/chem.200501012 DO - 10.1002/chem.200501012 ID - Hannon2006 ER - TY - JOUR AU - Huxley, M. AU - Sanchez-Cano, C. AU - Browning, M. J. AU - Navarro-Ranninger, C. AU - Quiroga, A. G. AU - Rodger, A. AU - Hannon, M. J. PY - 2010 DA - 2010// TI - An androgenic steroid delivery vector that imparts activity to a non-conventional platinum(II) metallo-drug JO - Dalton Trans VL - 39 UR - https://doi.org/10.1039/c0dt00838a DO - 10.1039/c0dt00838a ID - Huxley2010 ER - TY - JOUR AU - Sanchez-Cano, C. AU - Huxley, M. AU - Ducani, C. AU - Hamad, A. E. AU - Browning, M. J. AU - Navarro-Ranninger, C. AU - Quiroga, A. G. AU - Rodger, A. AU - Hannon, M. J. PY - 2010 DA - 2010// TI - Conjugation of testosterone modifies the interaction of mono-functional cationic platinum(II) complexes with DNA, causing significant alterations to the DNA helix JO - Dalton Trans VL - 39 UR - https://doi.org/10.1039/c0dt00839g DO - 10.1039/c0dt00839g ID - Sanchez-Cano2010 ER - TY - JOUR AU - Ruiz, J. AU - Rodriguez, V. AU - Cutillas, N. AU - Espinosa, A. AU - Hannon, M. J. AU - Novel, C. PY - 2011 DA - 2011// TI - N-chelate platinum(II) antitumor complexes bearing a lipophilic ethisterone pendant JO - J Inorg Biochem VL - 105 UR - https://doi.org/10.1016/j.jinorgbio.2010.12.005 DO - 10.1016/j.jinorgbio.2010.12.005 ID - Ruiz2011 ER - TY - JOUR AU - Baruah, H. AU - Wright, M. W. AU - Bierbach, U. PY - 2005 DA - 2005// TI - Solution structural study of a DNA duplex containing the guanine-N7 adduct formed by a cytotoxic platinum-acridine hybrid agent JO - Biochemistry VL - 44 UR - https://doi.org/10.1021/bi050021b DO - 10.1021/bi050021b ID - Baruah2005 ER - TY - CHAP AU - Chaney, S. G. AU - Ramachandran, S. AU - Sharma, S. AU - Dokholyan, N. V. AU - Temple, B. AU - Bhattacharyya, D. AU - Wu, Y. AU - Campbell, S. ED - Bonetti, A. ED - Leone, R. ED - Muggia, F. ED - Howell, S. PY - 2009 DA - 2009// TI - Differences in conformation and conformational dynamics between cisplatin and oxaliplatin DNA adducts BT - Platinum and Other Heavy Metal Compounds in Cancer Chemotherapy UR - https://doi.org/10.1007/978-1-60327-459-3_20 DO - 10.1007/978-1-60327-459-3_20 ID - Chaney2009 ER - TY - JOUR AU - Mantri, Y. AU - Lippard, S. J. AU - Baik, M. H. PY - 2007 DA - 2007// TI - Bifunctional binding of cisplatin to DNA: why does cisplatin form 1, 2-intrastrand cross-links with AG but not with GA? JO - J Am Chem Soc VL - 129 UR - https://doi.org/10.1021/ja067631z DO - 10.1021/ja067631z ID - Mantri2007 ER - TY - JOUR AU - Ramachandran, S. AU - Temple, B. R. AU - Chaney, S. G. AU - Dokholyan, N. V. PY - 2009 DA - 2009// TI - Structural basis for the sequence-dependent effects of platinum-DNA adducts JO - Nucleic Acids Res VL - 37 UR - https://doi.org/10.1093/nar/gkp029 DO - 10.1093/nar/gkp029 ID - Ramachandran2009 ER - TY - JOUR AU - Sharma, S. AU - Gong, P. AU - Temple, B. AU - Bhattacharyya, D. AU - Dokholyan, N. V. AU - Chaney, S. G. PY - 2007 DA - 2007// TI - Molecular dynamic simulations of cisplatin- and oxaliplatin-d(GG) intrastand cross-links reveal differences in their conformational dynamics JO - J Mol Biol VL - 373 UR - https://doi.org/10.1016/j.jmb.2007.07.079 DO - 10.1016/j.jmb.2007.07.079 ID - Sharma2007 ER - TY - JOUR AU - Spingler, B. AU - Whittington, D. A. AU - Lippard, S. J. PY - 2001 DA - 2001// TI - 2.4 Å crystal structure of an oxaliplatin 1, 2-d (GpG) intrastrand cross-link in a DNA dodecamer duplex JO - Inorg Chem VL - 40 UR - https://doi.org/10.1021/ic010790t DO - 10.1021/ic010790t ID - Spingler2001 ER - TY - JOUR AU - Zhu, J. AU - Zhao, Y. AU - Zhu, Y. AU - Wu, Z. AU - Lin, M. AU - He, W. AU - Wang, Y. AU - Chen, G. AU - Dong, L. AU - Zhang, J. PY - 2009 DA - 2009// TI - DNA cross-linking patterns induced by an antitumor-active trinuclear platinum complex and comparison with its dinuclear analogue JO - Chemistry VL - 15 UR - https://doi.org/10.1002/chem.200900217 DO - 10.1002/chem.200900217 ID - Zhu2009 ER - TY - JOUR AU - Zhu, Y. AU - Wang, Y. AU - Chen, G. PY - 2009 DA - 2009// TI - Differences in conformational dynamics of [Pt3(HPTAB)]6 + -DNA adducts with various cross-linking modes JO - Nucleic Acids Res VL - 37 UR - https://doi.org/10.1093/nar/gkp618 DO - 10.1093/nar/gkp618 ID - Zhu2009 ER - TY - JOUR AU - Marhefka, C. A. AU - Moore, B. M. AU - Bishop, T. C. AU - Kirkovsky, L. AU - Mukherjee, A. AU - Dalton, J. T. AU - Miller, D. D. PY - 2001 DA - 2001// TI - Homology modeling using multiple molecular dynamics simulations and docking studies of the human androgen receptor ligand binding domain bound to testosterone and nonsteroidal ligands JO - J Med Chem VL - 44 UR - https://doi.org/10.1021/jm0005353 DO - 10.1021/jm0005353 ID - Marhefka2001 ER - TY - JOUR AU - Zhou, H. AU - Singh, N. AU - Kim, K. S. PY - 2006 DA - 2006// TI - Homology modeling and molecular dynamics study of chorismate synthase from Shigella flexneri JO - J Mol Graph Model VL - 25 UR - https://doi.org/10.1016/j.jmgm.2006.02.013 DO - 10.1016/j.jmgm.2006.02.013 ID - Zhou2006 ER - TY - JOUR AU - Prusis, P. AU - Schiöth, H. B. AU - Muceniece, R. AU - Herzyk, P. AU - Afshar, M. AU - Hubbard, R. E. AU - Wikberg, J. E. S. PY - 1997 DA - 1997// TI - Modeling of the three-dimensional structure of the human melanocortin 1 receptor, using an automated method and docking of a rigid cyclic melanocyte-stimulating hormone core peptide JO - J Mol Graph Model VL - 15 UR - https://doi.org/10.1016/S1093-3263(98)00004-7 DO - 10.1016/S1093-3263(98)00004-7 ID - Prusis1997 ER - TY - JOUR AU - Yang, X. AU - Wang, Z. AU - Dong, W. AU - Ling, L. AU - Yang, H. AU - Chen, R. PY - 2003 DA - 2003// TI - Modeling and docking of the three-dimensional structure of the human melanocortin 4 receptor JO - J Protein Chem VL - 22 UR - https://doi.org/10.1023/A:1025386022852 DO - 10.1023/A:1025386022852 ID - Yang2003 ER - TY - BOOK AU - Case, D. AU - Darden, T. AU - Cheatham, T. AU - Simmerling, C. AU - Wang, J. AU - Duke, R. AU - Luo, R. AU - Merz, K. AU - Pearlman, D. AU - Crowley, M. PY - 2006 DA - 2006// TI - AMBER 9 PB - University of California CY - San Francisco ID - Case2006 ER - TY - JOUR AU - Kobayashi, A. AU - Ohbayashi, K. AU - Aoki, R. AU - Chang, H. C. AU - Kato, M. PY - 2011 DA - 2011// TI - Synthesis, structure and photophysical properties of a flavin-based platinum (II) complex JO - Dalton Trans VL - 40 UR - https://doi.org/10.1039/c0dt01139h DO - 10.1039/c0dt01139h ID - Kobayashi2011 ER - TY - JOUR AU - Zhou, L. PY - 2009 DA - 2009// TI - Theoretical analysis on the transition state of the anticancer drug trans-[PtCl2 (isopropylamine) 2] and its cis isomer binding to DNA purine bases JO - J Phys Chem B VL - 113 UR - https://doi.org/10.1021/jp806661g DO - 10.1021/jp806661g ID - Zhou2009 ER - TY - BOOK AU - Frisch, M. J. AU - Trucks, G. AU - Schlegel, H. AU - Scuseria, G. AU - Robb, M. AU - Cheeseman, J. AU - Scalmani, G. AU - Barone, V. AU - Mennucci, B. AU - Petersson, G. PY - 2009 DA - 2009// TI - Gaussian 09; Gaussian PB - Inc, Wallingford CY - CT ID - Frisch2009 ER - TY - JOUR AU - Zhu, Y. AU - Su, Y. AU - Li, X. AU - Wang, Y. AU - Chen, G. PY - 2008 DA - 2008// TI - Evaluation of Amber force field parameters for copper (II) with pyridylmethyl-amine and benzimidazolylmethyl-amine ligands: a quantum chemical study JO - Chem Phys Lett VL - 455 UR - https://doi.org/10.1016/j.cplett.2008.03.004 DO - 10.1016/j.cplett.2008.03.004 ID - Zhu2008 ER - TY - JOUR AU - Zhu, Y. AU - Wang, Y. AU - Chen, G. AU - Zhan, C. G. PY - 2009 DA - 2009// TI - A three-point method for evaluations of AMBER force field parameters: an application to copper-based artificial nucleases JO - Theor Chem Acc: Theory, Computation, and Modeling (Theoretica Chimica Acta) VL - 122 UR - https://doi.org/10.1007/s00214-008-0496-6 DO - 10.1007/s00214-008-0496-6 ID - Zhu2009 ER - TY - JOUR AU - Duan, Y. AU - Wu, C. AU - Chowdhury, S. AU - Lee, M. C. AU - Xiong, G. AU - Zhang, W. AU - Yang, R. AU - Cieplak, P. AU - Luo, R. AU - Lee, T. PY - 2003 DA - 2003// TI - A point‐charge force field for molecular mechanics simulations of proteins based on condensed‐phase quantum mechanical calculations JO - J Comput Chem VL - 24 UR - https://doi.org/10.1002/jcc.10349 DO - 10.1002/jcc.10349 ID - Duan2003 ER - TY - JOUR AU - Lee, M. C. AU - Duan, Y. PY - 2004 DA - 2004// TI - Distinguish protein decoys by using a scoring function based on a new AMBER force field, short molecular dynamics simulations, and the generalized born solvent model JO - Proteins VL - 55 UR - https://doi.org/10.1002/prot.10470 DO - 10.1002/prot.10470 ID - Lee2004 ER - TY - JOUR AU - Yao, S. AU - Plastaras, J. P. AU - Marzilli, L. G. PY - 1994 DA - 1994// TI - A molecular mechanics AMBER-type force field for modeling platinum complexes of guanine derivatives JO - Inorg Chem VL - 33 UR - https://doi.org/10.1021/ic00104a015 DO - 10.1021/ic00104a015 ID - Yao1994 ER - TY - JOUR AU - Wang, J. AU - Wolf, R. M. AU - Caldwell, J. W. AU - Kollman, P. A. AU - Case, D. A. PY - 2004 DA - 2004// TI - Development and testing of a general amber force field JO - J Comput Chem VL - 25 UR - https://doi.org/10.1002/jcc.20035 DO - 10.1002/jcc.20035 ID - Wang2004 ER - TY - JOUR AU - Lavery, R. AU - Sklenar, H. PY - 1988 DA - 1988// TI - The definition of generalized helicoidal parameters and of axis curvature for irregular nucleic acids JO - J Biomol Struct Dyn VL - 6 UR - https://doi.org/10.1080/07391102.1988.10506483 DO - 10.1080/07391102.1988.10506483 ID - Lavery1988 ER - TY - JOUR AU - Strahs, D. AU - Schlick, T. PY - 2000 DA - 2000// TI - A-tract bending: insights into experimental structures by computational models JO - J Mol Biol VL - 301 UR - https://doi.org/10.1006/jmbi.2000.3863 DO - 10.1006/jmbi.2000.3863 ID - Strahs2000 ER - TY - JOUR AU - Yang, B. AU - Zhu, Y. AU - Wang, Y. AU - Chen, G. PY - 2010 DA - 2010// TI - Interaction identification of Zif268 and TATAZF proteins with GC‐/AT‐rich DNA sequence: a theoretical study JO - J Comput Chem VL - 32 UR - https://doi.org/10.1002/jcc.21630 DO - 10.1002/jcc.21630 ID - Yang2010 ER - TY - JOUR AU - Goodsell, D. S. AU - Dickerson, R. E. PY - 1994 DA - 1994// TI - Bending and curvature calculations in B-DNA JO - Nucleic Acids Res VL - 22 UR - https://doi.org/10.1093/nar/22.24.5497 DO - 10.1093/nar/22.24.5497 ID - Goodsell1994 ER - TY - JOUR AU - Poncin, M. AU - Piazzola, D. AU - Lavery, R. PY - 1992 DA - 1992// TI - DNA flexibility as a function of allomorphic conformation and of base sequence JO - Biopolymers VL - 32 UR - https://doi.org/10.1002/bip.360320817 DO - 10.1002/bip.360320817 ID - Poncin1992 ER - TY - JOUR AU - Stofer, E. AU - Lavery, R. PY - 1994 DA - 1994// TI - Measuring the geometry of DNA grooves JO - Biopolymers VL - 34 UR - https://doi.org/10.1002/bip.360340305 DO - 10.1002/bip.360340305 ID - Stofer1994 ER -