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Table 5 Relationship between the size of the protein and the computing time

From: Modeling protein conformational transitions by a combination of coarse-grained normal mode analysis and robotics-inspired methods

Protein

Residues

Time (hours)

ADK

214

0.4

LAO

238

0.68

DAP

320

0.79

NS3

436

2.11

DDT

535

10.72

GroEL

547

5.84

ATP

573

6.74

LTF

691

11.17

IBS

876

19.96

HKC

917

28.93

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BMC Structural Biology

ISSN: 1472-6807

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