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Table 7 Known intermediate structures and their distances to the closest conformation in the computed transition path.

From: Modeling protein conformational transitions by a combination of coarse-grained normal mode analysis and robotics-inspired methods

PDB ID

RMSD

Iteration

Path percent

1DVR (A)

1.48

2

9%

2RH5 (A)

1.80

1

4%

2RH5 (B)

1.91

3

15%

1E4Y (A)

2.20

27

94%