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Table 4 Count and rank sum of sequences

From: Enhancement of accuracy and efficiency for RNA secondary structure prediction by sequence segmentation and MapReduce

  Non-pseudoknotted sequences   Pseudoknotted sequences
Prediction R-co R-rs C-co C-rs O-co O-rs R-co R-rs C-co C-rs O-co O-rs
IPknot 7.7 74.0 24.7 115.5 17.7 110.5 2.0 32.0 7.0 47.0 14.0 59.0
pknotsRG 6.3 71.5 22.3 115.5 21.3 113.0 2.0 30.0 7.0 50.0 14.0 58.0
HotKnots 4.0 68.0 22.0 115.5 24.0 116.5 1.0 32.0 6.0 47.0 16.0 59.0
NUPACK 4.0 68.5 17.0 115.5 29.0 120.0 1.3 24.5 7.3 40.5 9.3 43.0
PKNOTS 1.0 55.5 17.5 114.5 31.5 130.0 1.5 21.0 4.0 35.5 11.5 45.5
UNAFold 4.0 67.0 25.0 118.0 21.0 115.0       
RNAfold 4.0 65.0 18.0 112.5 28.0 122.5       
  1. Count (co) and rank sum (rs) of sequences attaining the highest MAR with each chunking method for the various prediction programs.