From: Enhancement of accuracy and efficiency for RNA secondary structure prediction by sequence segmentation and MapReduce
Mean Total Time (sec)
RNA2(∼ 1300 bases)
RNA1(∼ 3100 bases)
60
150
300
Centered
257.7
232.3
185.7
3228.7
2871.7
2303.9
Optimized
226.6
197.4
164.6
2758.0
2366.0
1907.7
Opti./Cent.
0.88
0.85
0.89
0.82
0.83