Figure 7

Potential energy is plotted against lRMSD to the native structure for each conformation in the output ensemble Ω. Results are combined over all 3 runs and shown for the first 3 of the 5 selected proteins where the Rosetta energy function seems to have an advantage over AMW (corresponding PDB ids are 1bq9, 1sap, and 1hze6A). For each selected protein, the ensemble obtained with MEA and AMW is shown to the left, and that obtained with MEA and the Rosetta energy function is shown to the right.