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Table 3 Multimeric protein refinement results.

From: A conservation and biophysics guided stochastic approach to refining docked multimeric proteins

Protein Input Soln.1 Soln.2 Soln.3 Soln.4 Soln.5 Soln.6 Soln.7 Soln.8 Soln.9 Soln.10
1I3O 3.42 3.42 3.70 3.75 3.76 3.87 3.95 4.03 4.05 4.10 4.22
1JYO 6.45 6.40 6.40 6.40 6.48 6.52 6.57 6.75 6.77 6.80 6.98
1LOG 1.63 1.64 1.65 1.81 1.81 1.82 1.85 1.88 1.93 1.94 2.00
1QGW 3.28 2.98 3.06 3.10 3.10 3.15 3.23 3.44 3.47 3.53 3.55
1VCB 3.02 3.15 3.17 3.49 3.53 3.64 3.65 3.69 3.83 3.86 3.87
1W88 4.95 4.67 4.70 4.95 5.01 5.34 5.56 5.57 5.68 5.71 5.80
1WWW 2.73 2.24 2.30 2.36 2.44 2.50 2.51 2.63 2.70 2.72 2.73
2BBK 2.07 2.07 2.09 2.27 2.41 2.52 2.59 2.73 2.74 2.84 2.87
2PRG 5.75 5.69 5.75 5.76 5.76 5.77 5.79 5.80 5.82 5.83 5.84
6RLX 6.37 5.98 6.00 6.07 6.07 6.14 6.17 6.27 6.29 6.29 6.32
  1. Least RMSD values in Å with respect to the native structure are shown for the initial docked structure and ten best refinement results generated by our method for each input.