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Figure 6 | BMC Structural Biology

Figure 6

From: Consensus structural models for the amino terminal domain of the retrovirus restriction gene Fv1 and the Murine Leukaemia Virus capsid proteins

Figure 6

Consensus model for the FV1 N-terminal domain. (a) The model for the FV1 N-domain based on 1e6jP shown as a α-carbon trace with predicted α-helices coloured red (some fragments of predicted β-structure are coloured green). The molecule is in approximately the same orientation as in Figure 8(a). (b) The models based on 1e6jP and 1eia are shown superposed and coloured from blue (amino) to red (carboxy). Feint dashed lines connect identical residues. The wRMSd = 1.3 (uRMSd = 5.4) over 124 residues. Note: the modelling program rescales the secondary structure prediction values so that there is the same proportion of predicted structure as measured secondary structure on the model.

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