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Table 3 Control model similarity. The similarity of the capsid protein domains are tabulated as: uRMSd/PSId, both as calculated by the SAP program. The proteins are identified as in Table 4. The column "params" gives the MST parameter values S, G at which the four models in each row had maximum agreement as measured by the combined agreement score F v (Methods Sect n.).

From: Consensus structural models for the amino terminal domain of the retrovirus restriction gene Fv1 and the Murine Leukaemia Virus capsid proteins

str \ seq

D1D

QRJ

E6J

EIA

params

D1D

0.60/78.9

4.14/90.0

2.05/56.7

2.41/38.3

9,10

QRJ

5.58/100.

0.32/100.

3.58/88.4

5.51/100.

3,10

E6J

1.88/95.2

1.70/84.7

0.31/100.

1.39/100.

7,10

EIA

2.00/93.3

2.00/100.

1.28/100.

0.35/100.

8,20