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Table 1 On-line databases cross-referenced in COM e

From: COM e: the ontology of bioinorganic proteins

Database

URL used in COM e web interface

Reference

Chemical compounds

  

COMPOUND

http://srs.ebi.ac.uk/

[9]

chemPDB

http://www.ebi.ac.uk/msd-srv/chempdb/

 

RESID

http://srs.ebi.ac.uk/

[10]

NIST Chemistry WebBook

http://webbook.nist.gov/chemistry/

 

Protein sequence

  

SPTR

http://srs.ebi.ac.uk/

[11, 12]

Protein structure

  

PDB

http://oca.ebi.ac.uk/

[3]

Protein families

  

InterPro

http://www.ebi.ac.uk/interpro/

[13]

MEROPS

http://www.merops.ac.uk/

 

Protein function

  

ENZYME

http://srs.ebi.ac.uk/

[14]

GO

http://www.ebi.ac.uk/ego/

[7]

Bibliography

  

PubMed/MEDLINE

http://srs.ebi.ac.uk/

[15]