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Table 4 SOV measures between kaksi and other methods on the HRes set. SOV H : SOV for α-helix. SOV b : SOV for β-strand. KAKSI is taken as reference.

From: Protein secondary structure assignment revisited: a detailed analysis of different assignment methods

Method

SOV H

SOV b

DSSP

91.7%

92.1%

STRIDE

91.2%

91.9 %

SECSTR

89.0%

83.9%

PSEA

87.5%

82.7%

XTLSSTR

89.3%

73.4%

PDB

88.4%

89.4%