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Table 2 Classification of kinase activities by family and fold group, part 2.

From: A comprehensive update of the sequence and structure classification of kinases

Group

Family and PFAM/COG members

Kinase Activity (E.C.)

Representative PDB or gi

Group 3: ferredoxin-like fold kinases 10973 sequences

nucleoside-diphosphate kinase: PF00334 923 sequences

2.7.4.6 Nucleoside-diphosphate kinase

PDB: 2bef

 

HPPK: PF01288 609 sequences

2.7.6.3 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase

PDB: 1eqo

 

guanido kinases: PF00217 324 sequences

2.7.3.1 Guanidoacetate kinase

PDB: 1bg0

  

2.7.3.2 Creatine kinase

 
  

2.7.3.3 Arginine kinase

 
  

2.7.3.5 Lombricine kinase

 
 

histidine kinase: PF00512, COG2172 9117 sequences

2.7.1.37 Protein kinase (Histidine kinase)

PDB: 1i59

  

2.7.1.99 [Pyruvate dehydrogenase(lipoamide)] kinase

 
  

2.7.1.115 [3-methyl-2-oxobutanoate dehydrogenase (lipoamide)] kinase

 

Group 4: ribonuclease H-like 2768 sequences

COG0837, PF00349, PF00370, PF00871

2.7.1.1 Hexokinase

PDB: 1dgk

  

2.7.1.2 Glucokinase

 
  

2.7.1.4 Fructokinase

 
  

2.7.1.5 Rhamnulokinase

 
  

2.7.1.7 Mannokinase

 
  

2.7.1.12 Gluconokinase

 
  

2.7.1.16 L-ribulokinase

 
  

2.7.1.17 Xylulokinase

 
  

2.7.1.27 Erythritol kinase

 
  

2.7.1.30 Glycerol kinase

 
  

2.7.1.33 Pantothenate kinase

 
  

2.7.1.47 D-ribulokinase

 
  

2.7.1.51 L-fuculokinase

 
  

2.7.1.53 L-xylulokinase

 
  

2.7.1.55 Allose kinase

 
  

2.7.1.58 2-dehydro-3-deoxygalactonokinase

 
  

2.7.1.59 N-acetylglucosamine kinase

 
  

2.7.1.60 N-acylmannosamine kinase

 
  

2.7.1.63 Polyphosphate-glucose phosphotransferase

 
  

2.7.1.85 Beta-glucoside kinase

 
  

2.7.2.1 Acetate kinase

 
  

2.7.2.7 Butyrate kinase

 
  

2.7.2.14 Branched-chain-fatty-acid kinase

 
  

2.7.2.- Propionate kinase

 

Group 5: TIM β/α-barrel kinase 1119 sequences

PF00224

2.7.1.40 Pyruvate kinase

PDB: 1a49

Group 6: GHMP kinase 885 sequences

COG1685, COG1907, PF00288, PF01971

2.7.1.6 Galactokinase (*)

PDB: 1h72

  

2.7.1.36 Mevalonate kinase

 
  

2.7.1.39 Homoserine kinase

 
  

2.7.1.46 L-arabinokinase

 
  

2.7.1.52 Fucokinase

 
  

2.7.1.71 Shikimate kinase

 
  

2.7.1.148 4-(cytidine 5'-diphospho)-2- C- methyl-D- erythritol kinase (*)

 
  

2.7.4.2 Phosphomevalonate kinase

 

Group 7: AIR synthetase-like 1843 sequences

PF00586

2.7.4.16 Thiamine-phosphate kinase

PDB: 1cli

  

2.7.9.3 Selenide, water dikinase

 

Group 8: riboflavin kinase (previously Group 10) 565 sequences

PF01687

2.7.1.26 Riboflavin kinase (*)

PDB: 1nb9

Group 9: dihydroxyacetone kinase (previously Group 17) 197 sequences

 

2.7.1.29 Glycerone kinase (*)

PDB: 1un9

Group 10: putative glycerate kinase (previously Group 16) 148 sequences

COG2379

2.7.1.31 Glycerate kinase (*)

PDB: 1o0u

Group 11: polyphosphate kinase (previously Group 9) 446 sequences

PF02503

2.7.4.1 Polyphosphate kinase

gi|7465499 [48..730]

Group 12: integral membrane kinases (previously Group 8) 263 sequences

dolichol kinase: PF01879 127 sequences

2.7.1.108 Dolichol kinase

gi|6323655 [349..513]

 

undecaprenol kinase 136 sequences

2.7.1.66 Undecaprenol kinase

gi|1705428