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Table 2 Classification of kinase activities by family and fold group, part 2.

From: A comprehensive update of the sequence and structure classification of kinases

Group Family and PFAM/COG members Kinase Activity (E.C.) Representative PDB or gi
Group 3: ferredoxin-like fold kinases 10973 sequences nucleoside-diphosphate kinase: PF00334 923 sequences Nucleoside-diphosphate kinase PDB: 2bef
  HPPK: PF01288 609 sequences 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase PDB: 1eqo
  guanido kinases: PF00217 324 sequences Guanidoacetate kinase PDB: 1bg0 Creatine kinase Arginine kinase Lombricine kinase  
  histidine kinase: PF00512, COG2172 9117 sequences Protein kinase (Histidine kinase) PDB: 1i59 [Pyruvate dehydrogenase(lipoamide)] kinase [3-methyl-2-oxobutanoate dehydrogenase (lipoamide)] kinase  
Group 4: ribonuclease H-like 2768 sequences COG0837, PF00349, PF00370, PF00871 Hexokinase PDB: 1dgk Glucokinase Fructokinase Rhamnulokinase Mannokinase Gluconokinase L-ribulokinase Xylulokinase Erythritol kinase Glycerol kinase Pantothenate kinase D-ribulokinase L-fuculokinase L-xylulokinase Allose kinase 2-dehydro-3-deoxygalactonokinase N-acetylglucosamine kinase N-acylmannosamine kinase Polyphosphate-glucose phosphotransferase Beta-glucoside kinase Acetate kinase Butyrate kinase Branched-chain-fatty-acid kinase  
   2.7.2.- Propionate kinase  
Group 5: TIM β/α-barrel kinase 1119 sequences PF00224 Pyruvate kinase PDB: 1a49
Group 6: GHMP kinase 885 sequences COG1685, COG1907, PF00288, PF01971 Galactokinase (*) PDB: 1h72 Mevalonate kinase Homoserine kinase L-arabinokinase Fucokinase Shikimate kinase 4-(cytidine 5'-diphospho)-2- C- methyl-D- erythritol kinase (*) Phosphomevalonate kinase  
Group 7: AIR synthetase-like 1843 sequences PF00586 Thiamine-phosphate kinase PDB: 1cli Selenide, water dikinase  
Group 8: riboflavin kinase (previously Group 10) 565 sequences PF01687 Riboflavin kinase (*) PDB: 1nb9
Group 9: dihydroxyacetone kinase (previously Group 17) 197 sequences Glycerone kinase (*) PDB: 1un9
Group 10: putative glycerate kinase (previously Group 16) 148 sequences COG2379 Glycerate kinase (*) PDB: 1o0u
Group 11: polyphosphate kinase (previously Group 9) 446 sequences PF02503 Polyphosphate kinase gi|7465499 [48..730]
Group 12: integral membrane kinases (previously Group 8) 263 sequences dolichol kinase: PF01879 127 sequences Dolichol kinase gi|6323655 [349..513]
  undecaprenol kinase 136 sequences Undecaprenol kinase gi|1705428