Table 1 Statistics of the 25 lowest energy conformations
From: DWNN, a novel ubiquitin-like domain, implicates RBBP6 in mRNA processing and ubiquitin-like pathways
| Restraints | |
|---|---|
| NOE-derived restraints | |
| short-range, |i-j|< = 1 | 865 |
| medium-range, 1<|i-j|<5 | 297 |
| long-range, |i-j|> = 5 | 682 |
| Dihedral restraints (TALOS) | |
| φ angle | 56 |
| ψ angle | 57 |
| Final structures | |
| Pairwise superposition of backbone atoms of residues 2–75 | |
| RMSD over backbone heavy atoms | 0.57 Å |
| RMSD over all heavy atoms | 1.16 Å |
| Ramachandran plot appearance | |
| Most favoured regions | 92.32 +- 2.77 |
| Generously allowed regions | 6.74 +- 2.47 |
| Generously allowed regions | 0.62 +- 0.85 |
| Disallowed regions | 0.31 +- 0.57 |
| Bad VDW contacts (PROCHECK) | 0.00 +- 0.00 |
| PROCHECK G-factors | |
| Dihedrals | -0.21 +- 0.05 |
| Covalent | 0.15 +- 0.03 |
| Overall | -0.09 +- 0.04 |
| WHATCHECK Z-scores | |
| 1st generation packing quality | -0.34 +- 0.18 |
| 2nd generation packing quality | -1.79 +- 0.34 |
| chi-1/chi-2 rotamer normality | -2.10 +- 0.36 |
| Backbone conformation | -1.12 +- 0.47 |
| Bond lengths | 0.85 +- 0.02 |
| Omega angle restraints | 0.63 +- 0.05 |
| Side chain planarity | 0.86 +- 0.11 |
| Improper dihedral distribution | 0.75 +- 0.03 |
| Inside/Outside distribution | 1.10 +- 0.02 |