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Table 1 Statistics of the 25 lowest energy conformations

From: DWNN, a novel ubiquitin-like domain, implicates RBBP6 in mRNA processing and ubiquitin-like pathways

Restraints

NOE-derived restraints

 

   short-range, |i-j|< = 1

865

   medium-range, 1<|i-j|<5

297

   long-range, |i-j|> = 5

682

Dihedral restraints (TALOS)

 

   φ angle

56

   ψ angle

57

Final structures

Pairwise superposition of backbone atoms of residues 2–75

 

   RMSD over backbone heavy atoms

0.57 Ã…

   RMSD over all heavy atoms

1.16 Ã…

Ramachandran plot appearance

 

   Most favoured regions

92.32 +- 2.77

   Generously allowed regions

6.74 +- 2.47

   Generously allowed regions

0.62 +- 0.85

   Disallowed regions

0.31 +- 0.57

Bad VDW contacts (PROCHECK)

0.00 +- 0.00

PROCHECK G-factors

 

   Dihedrals

-0.21 +- 0.05

   Covalent

0.15 +- 0.03

   Overall

-0.09 +- 0.04

WHATCHECK Z-scores

 

   1st generation packing quality

-0.34 +- 0.18

   2nd generation packing quality

-1.79 +- 0.34

   chi-1/chi-2 rotamer normality

-2.10 +- 0.36

   Backbone conformation

-1.12 +- 0.47

   Bond lengths

0.85 +- 0.02

   Omega angle restraints

0.63 +- 0.05

   Side chain planarity

0.86 +- 0.11

   Improper dihedral distribution

0.75 +- 0.03

   Inside/Outside distribution

1.10 +- 0.02