Figure 2From: Prediction of transmembrane helix orientation in polytopic membrane proteinsDistribution of amino acid residues involved into interhelical interactions in transmembrane regions of membrane proteins at heptad repeat positions abcdefg. Types of helical pairs are: AP-LH – antiparallel left-handed; AP-RH – antiparallel right-handed; P-LH – parallel left-handed; P-RH – parallel right-handed. The combined frequencies of interacting residues from helix-helix interfaces at a, d, e and g positions in the heptad repeat are: left-handed parallel helical pairs, 94.7%; left-handed antiparallel helical pairs, 92.4%; right-handed parallel helical pairs, 86.9%; and right-handed antiparallel helical pairs, 86.5%.Back to article page