Table 3 Prediction accuracy obtained for the 505 sequences of the independent test set, using single sequences
From: Analysis of an optimal hidden Markov model for secondary structure prediction
OSS-HMM | PSIPRED | |||||||
|---|---|---|---|---|---|---|---|---|
Q obs | Q pred | MCC | SOV | Q obs | Q pred | MCC | SOV | |
Helix | 72.1 | 72.5 | 0.56 | 67.7 | 70.5 | 70.4 | 0.53 | 66.7 |
Strand | 51.9 | 64.5 | 0.47 | 58.3 | 56.6 | 60.8 | 0.47 | 60.5 |
Coil | 73.2 | 65.5 | 0.47 | 63.9 | 69.2 | 66.7 | 0.46 | 61.9 |
Q 3 | SOV | Q 3 | SOV | |||||
Global | 67.9 | 63.9 | 66.8 | 63.3 | ||||