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Figure 5 | BMC Structural Biology

Figure 5

From: Exploring dynamics of protein structure determination and homology-based prediction to estimate the number of superfamilies and folds

Figure 5

Average numbers of superfamilies assigned to a SMOG cluster and of clusters corresponding to a superfamily. Average number of superfamilies assigned to a SMOG cluster (A) and average number of clusters corresponding to a superfamily (B), for various linkage stringencies, plotted as functions of the number of solved SMOGs. Points in the graphs represent consecutive years, starting from 1995. Linkage stringencies are indicated as the cutoffs for E-value and W (fraction of queries in SMOG 1 that provide PSI-BLAST detection of sequences from SMOG 2). Graphs for separate SMOGs are marked as "No clustering".

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BMC Structural Biology

ISSN: 1472-6807

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