DynDomaparameters | Pex5p(C)/mSCP2bversus previous apo-Pex5p(C)c | Pex5p(C)/mSCP2bversus new apo-Pex5p(C)d | new apo-Pex5p(C)dversus previous apo-Pex5p(C)c |
---|---|---|---|
Whole protein residues | 335–639 | 335–639 | 315–639 |
Whole protein RMSD (Ă… 2 ) | 3.06 | 3.26 | 2.20 |
Fixed domain residues | 337–523 | 337–518 | 323–485 |
Fixed domain RMSD (Ă… 2 ) | 1.40 | 2.32 | 0.71 |
Rotation angle (°) | 19.7 | 20.0 | 14.2 |
Translation along axis (Ă…) | -0.7 | -0.1 | 0.1 |
Bending residues | 495–500 (end of TPR5 helix A) 523–524 (start of TPR6 helix A) 533–537 (end of TPR6 helix A) | 519–520 (loop connection TPRs 5 and 6) 530–531 (middle of TPR6 helix A) 535–536 (end of TPR6 helix A) 588–601 (entire 7C-loop) | 485–489 (loop connecting TPRs 4 and 5) 496–499 (end of TPR5 helix A) |
% Closure motion | 92.0 | 83.8 | 1.7 |