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Figure 4 | BMC Structural Biology

Figure 4

From: Energetics of the protein-DNA-water interaction

Figure 4

a) Contributions of various structural components of the protein-DNA association. Shown are protein-DNAphosphate, protein-DNAribose and protein-DNAbase-edge contributions, colored as indicated in the legend. b) HINT score contributions calculated for the interaction between water molecules (having total Rank ≥ 4 and non-zero Rank with both macromolecules) and the protein-DNA interface. Shown are the water-DNAphosphate, water-DNAribose, water-DNAbase and water-protein contributions, colored as indicated in the legend. Bars corresponding to 1h88, 1hcr, 1jkr and 1pnr complexes are missing because no significant crystallographic water molecules were found in the crystal structures.

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