Distantly related lipocalins share two conserved clusters of hydrophobic residues: use in homology modeling

BMC Structural Biology

Table 2 Conserved properties and interactions for Helix 1.

Position	in/out.	Conserved properties		Conserved Interactions
				9/10	8/8	7/8
26	out	phi	8/10
34	in	pho	8/10
35	out	phi	10/10		38	38
38	out	phi	10/10		35	35
39	in	pho	10/10			48
39				80	80	80
39						91
39				158	158	158
39				168		168

Positions in H1 that are conserved and related structural information i.e. the position of the residue relative to the barrel; inside (in) or outside (out). The conserved properties (10/10 and 8/10 conservation) are also presented (see table 1 for details), as well as the conserved interaction partner (for 9/10, 8/8 and 7/8 lipocalins).

ISSN: 1472-6807