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Table 1 Hyperthermophilic/Mesophilic (1–24) and Thermophilic/Mesophilic (25–38) pairs in dataset A*

From: "Hot cores" in proteins: Comparative analysis of the apolar contact area in structures from hyper/thermophilic and mesophilic organisms

ID PDB Class Organism Res (Å) PDB Class Mesophile Res (Å) ΔÅ %identity Functional Class Description
1 1A2Z A a/b Thermococcus litoralis 1.73 1AUG A a/b Bacillus amyloliquefaciens 2.00 0.27 37 Peptidase Pyrrolidone Carboxyl Peptidase
2 1A53 0 a/b Sulfolobus solfataricus 2.00 1PII 0 a/b Escherichia coli 2.00 0.00 38 Synthase Indole-3-Glycerolphosphate Synthase
3 1DD3 A a/b Thermotoga maritima 2.00 1CTF 0 a/b Escherichia coli 1.70 0.3 69 Ribosomal Ribosomal Protein
4 1DQI A mainly b Pyrococcus furiosus 1.70 1DFX 0 mainly b D. desulfuricans 1.90 0.20 34 Oxidoreductase Superoxide Reductase
5 1FTR A a+b Methanopyrus kandleri 1.70 1M5S A a+b Methanosarcina barkeri 1.85 0.15 59 Transferase Formyltransferase
6 1G29 1 a/b Thermococcus litoralis 1.90 1B0U A a/b Salmonella typhimurium 1.50 0.40 31 Sugar Binding Malk Protein
7 1HQK A a/b Aquifex aeolicus 1.60 1W19 A a/b M. tuberculosis 2.00 0.40 50 Transferase Lumazine Synthase
8 1IU8 A a/b Pyrococcus horikoshii 1.60 1AUG A a/b Bacillus amyloliquefaciens 2.00 0.40 45 Hydrolase Pyrrolidone-Carboxylate Peptidase
9 1J31 A a/b Pyrococcus horikoshii 1.60 1UF5 A a/b Agrobacterium sp. 1.60 0.00 31 Unknown Hypothetical Protein Ph0642
10 1JI0 A a/b Thermotoga maritima 2.00 1G6H A a/b Escherichia coli 1.60 0.40 31 Carrier Abc Transporter
11 1JVB A a/b Sulfolobus solfataricus 1.85 1M6H A a/b Homo sapiens 2.00 0.15 31 Oxidoreductase Alcohol Dehydrogenase
12 1LK5 A a/b Pyrococcus horikoshii 1.75 1M0S A a/b Haemophilus influenzae 1.90 0.15 42 Isomerase D-Ribose-5-Phosphate Isomerase
13 1M2K A a/b Archaeoglobus fulgidus 1.47 1S5P A a/b Escherichia coli 1.96 0.49 41 Trascriptional Regulator Sir2 Homologue
14 1M5H A a+b Archaeoglobus fulgidus 2.00 1M5S A a+b Methanosarcina barkeri 1.85 0.15 68 Transferase Formyltransferase
15 1NSJ 0 a/b Thermotoga maritima 2.00 1PII 0 a/b Escherichia coli 2.00 0.00 33 Isomerase P-Ribosylanthranilate Isomerase
16 1P1L A a/b Archaeoglobus fulgidus 2.00 1NAQ A a/b Escherichia coli 1.70 0.3 33 Unknown Cation Resistent Protein Cut-A
17 1U1I A a/b Archaeoglobus fulgidus 1.90 1P1J A a/b Saccharomyces cerevisiae 1.70 0.20 31 Isomerase Myo-Inositol Phosphate Synthase
18 1UKU A a/b Pyrococcus horikoshii 1.45 1NAQ A a/b Escherichia coli 1.70 0.25 39 Metal Binding Protein Cation Resistent Protein Cut-A
19 1V3W A mainly b Pyrococcus horikoshii 1.50 1XHD A mainly b Bacillus cereus 1.90 0.40 40 Lyase Ferripyochelin Binding Protein
20 1V7R A a/b Pyrococcus horikoshii 1.40 1K7K A a/b Escherichia coli 1.50 0.10 34 Hydrolase Hypothetical Protein Ph1917
21 1VE0 A a/b Sulfolobus tokodaii 2.00 1VMH A a/b C. acetobutylicum 1.31 0.69 42 Metal Binding Protein Hypothetical Protein St2072
22 1VPE 0 a/b Thermotoga maritima 2.00 1HDI A a/b Sus scrofa 1.80 0.20 47 Transferase Phosphoglycerate Kinase
23 1XGS A mainly a Pyrococcus furiosus 1.75 1B6A 0 mainly a Homo sapiens 1.60 0.15 40 Aminopeptidase Methionine Aminopeptidase
24 1XTY A a/b Pyrococcus abyssi 1.80 1Q7S A a/b Homo sapiens 2.00 0.20 48 Hydrolase Peptidyl-Trna Hydrolase
25 1EE8 A mainly a Thermus thermophilus 1.90 1TDZ A mainly a Lactococcus lactis 1.80 0.10 35 Dna Binding Protein Fpg Protein
26 1GD7 A mainly b Thermus thermophilus 2.00 1PXF A mainly b Escherichia coli 1.87 0.13 34 Rna Binding Protein Csaa Protein
27 1J09 A a/b Thermus thermophilus 1.80 1NZJ A a/b Escherichia coli 1.50 0.30 33 Ligase Glutamil-Trna Synthase
28 1J3N A a/b Thermus thermophilus 2.00 1E5M A a/b Synechocystis sp. 1.54 0.46 55 Transferase Acyl Carrier Protein
29 1JBO A mainly a T. elongatus 1.45 1B8D A mainly a Griffithsia monilis 1.90 0.45 38 Photosynthesis Phycocyanin
30 1MNG A mainly a Thermus thermophilus 1.80 1GV3 A mainly a Anabaena sp. 2.00 0.20 59 Oxidoreductase Superoxide Dismutase
31 1SRV A a/b Thermus thermophilus 1.70 1KID 0 a/b Escherichia coli 1.70 0.00 69 Chaperone Groel
32 1UZB A a/b Thermus thermophilus 1.40 1O0A A a/b Halobacterium salinarum 1.42 0.02 34 Oxidoreductase 1-Pyrroline-5-Carboxylate Dehydrogenase
33 1V6S A a/b Thermus thermophilus 1.50 16PK 0 a/b Trypanosoma brucei 1.60 0.10 43 Transferase Phosphoglycerate Kinase
34 1V8F A a/b Thermus thermophilus 1.90 1N2E A a/b M. tuberculosis 1.60 0.30 55 Ligase Pantothenate Synthetase
35 1VC4 A a/b Thermus thermophilus 1.80 1PII 0 a/b Escherichia coli 2.00 0.20 37 Lyase Indole-3-Glycerolphosphate Synthase
36 1VCD A a/b Thermus thermophilus 1.70 1SJY A a/b Deinococcus radiodurans 1.39 0.31 34 Hydrolase Ap6a Hydroxylase Ndx1
37 1YYA A a/b Thermus thermophilus 1.60 1MO0 A a/b Caenorhabditis elegans 1.70 0.10 44 Isomerase Triosephosphate Isomerase
38 2PRD 0 a/b Thermus thermophilus 2.00 1SXV A a/b M. tuberculosis 1.30 0.70 51 Hydrolase Inorganic Pyrophosphatase
  1. * Optimal growth temperatures are between 50°C and 80°C for thermophiles, and above 80°C for hyperthermophiles