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Table 2 Hyperthermophilic/Mesophilic (1–38) and Thermophilic/Mesophilic (39–59) pairs in dataset B

From: "Hot cores" in proteins: Comparative analysis of the apolar contact area in structures from hyper/thermophilic and mesophilic organisms

ID PDB Class Organism Res (Å) PDB Class Mesophile Res (Å) ΔÅ %identity Functional Class Description
1 1A2Z A a/b Thermococcus litoralis 1.73 1AUG A a/b Bacillus amyloliquefaciens 2.00 0.27 37 Peptidase Pyrrolidone Carboxyl Peptidase
2 1A53 0 a/b Sulfolobus solfataricus 2.00 1PII 0 a/b Escherichia coli 2.00 0.00 38 Synthase Indole-3-Glycerolphosphate Synthase
3 1DQI A mainly b Pyrococcus furiosus 1.70 1DFX 0 mainly b Desulfovibrio desulfuricans 1.90 0.20 34 Oxidoreductase Superoxide Reductase
4 1FTR A a+b Methanopyrus kandleri 1.70 1M5S A a+b Methanosarcina barkeri 1.85 0.15 59 Transferase Formyltransferase
5 1DD3 A a/b Thermotoga maritima 2.00 1CTF 0 a/b Escherichia coli 1.70 0.3 69 Ribosomal Ribosomal Protein
6 1G29 1 a/b Thermococcus litoralis 1.90 1B0U A a/b Salmonella typhimurium 1.50 0.40 31 Sugar Binding Malk Protein
7 1HDG O a/b Thermotoga maritima 2.50 1RM4 A a/b Spinacia oleracea 2.00 0.50 56 Oxidoreductase Glyceraldehyde 3 Phosphate Dehydrogenase
8 1HQK A a/b Aquifex aeolicus 1.60 1W19 A a/b Mycobacterium tuberculosis 2.00 0.40 50 Transferase Lumazine Synthase
9 1I4N A a/b Thermotoga maritima 2.50 1PII 0 a/b Escherichia coli 2.00 0.50 34 Lyase Indole-3-Glycerolphosphate Synthase
10 1IOF A a/b Pyrococcus furiosus 2.20 1AUG A a/b Bacillus amyloliquefaciens 2.00 0.20 43 Hydrolase Pyrrolidone-Carboxylate Peptidase
11 1IU8 A a/b Pyrococcus horikoshii 1.60 1AUG A a/b Bacillus amyloliquefaciens 2.00 0.40 45 Hydrolase Pyrrolidone-Carboxylate Peptidase
12 1J0A A a/b Pyrococcus horikoshii 2.50 1TZJ A a/b Pseudomonas sp. 1.99 0.51 31 Lyase Aminocyclopropane Carboxylate Deaminase
13 1J31 A a/b Pyrococcus horikoshii 1.60 1UF5 A a/b Agrobacterium sp. 1.60 0.00 31 Unknown Hypothetical Protein Ph0642
14 1JI0 A a/b Thermotoga maritima 2.00 1G6H A a/b Escherichia coli 1.60 0.40 31 Carrier Abc Transporter
15 1JJI A a/b Archaeoglobus fulgidus 2.20 1JKM B a/b Bacillus subtilis 1.85 0.35 35 Hydrolase Carboxylesterase
16 1JVB A a/b Sulfolobus solfataricus 1.85 1M6H A a/b Homo sapiens 2.00 0.15 31 Oxidoreductase Alcohol Dehydrogenase
17 1LK5 A a/b Pyrococcus horikoshii 1.75 1M0S A a/b Haemophilus influenzae 1.90 0.15 42 Isomerase D-Ribose-5-Phosphate Isomerase
18 1M2K A a/b Archaeoglobus fulgidus 1.47 1S5P A a/b Escherichia coli 1.96 0.49 41 Trascriptional Regulator Sir2 Homologue
19 1M4Y A a+b Thermotoga maritima 2.10 1G3K A a+b Haemophilus influenzae 1.90 0.20 66 Hydrolase Hslv
20 1M5H A a+b Archaeoglobus fulgidus 2.00 1M5S A a+b Methanosarcina barkeri 1.85 0.15 68 Transferase Formyltransferase
21 1MXG A a/b Pyrococcus woesei 1.60 1VJS 0 a/b Bacillus licheniformis 1.70 0.10 31 Idrolasi AAmilase
22 1NSJ 0 a/b Thermotoga maritima 2.00 1PII 0 a/b Escherichia coli 2.00 0.00 33 Isomerase P-Ribosylanthranilate Isomerase
23 1P1L A a/b Archaeoglobus fulgidus 2.00 1NAQ A a/b Escherichia coli 1.70 0.3 33 Unknown Cation Resistent Protein Cut-A
24 1OJU A a/b Archaeoglobus fulgidus 2.79 1GUZ A a/b Chlorobium vibrioforme 2.00 0.79 34 Oxidoreductase Malate Dehydrogenase
25 1U1I A a/b Archaeoglobus fulgidus 1.90 1P1J A a/b Saccharomyces cerevisiae 1.70 0.20 31 Isomerase Myo-Inositol Phosphate Synthase
26 1UE8 A mainly a Sulfolobus tokodaii 3.00 1ODO A mainly a Streptomyces coelicolor 1.85 1.15 32 Unknown Cytochrome P450
27 1UKU A a+b Pyrococcus horikoshii 1.45 1NAQ A a+b Escherichia coli 1.70 0.25 39 Metal Binding Protein Cation Resistent Protein Cut-A
28 1ULZ A a/b Aquifex aeolicus 2.20 1DV1 A a/b Escherichia coli 1.90 0.30 53 Ligase Pyruvate Carboxylase
29 1UVV A a/b Thermotoga maritima 2.75 1GS5 A a/b Escherichia coli 1.50 1.25 35 Transferase Acetylglutamate Kinase
30 1V3W A mainly b Pyrococcus horikoshii 1.50 1XHD A mainly b Bacillus cereus 1.90 0.40 40 Lyase Ferripyochelin Binding Protein
31 1V7R A a/b Pyrococcus horikoshii 1.40 1K7K A a/b Escherichia coli 1.50 0.10 34 Hydrolase Hypothetical Protein Ph1917
32 1VE0 A a/b Sulfolobus tokodaii 2.00 1VMH A a/b Clostridium acetobutylicum 1.31 0.69 42 Metal Binding Protein Hypothetical Protein St2072
33 1VFF A a/b Pyrococcus horikoshii 2.55 1E4I A a/b Bacillus polymyxa 2.00 0.55 32 Hydrolase B-Glucosidase
34 1VPE 0 a/b Thermotoga maritima 2.00 1HDI A a/b Sus scrofa 1.80 0.20 48 Transferase Phosphoglycerate Kinase
35 1WPW A a/b Sulfolobus tokodaii 2.80 1A05 A a/b Thiobacillus ferrooxidans 2.00 0.80 40 Oxidoreductase Ipm Dehydrogenase
36 1XGS A mainly a Pyrococcus furiosus 1.75 1B6A 0 mainly a Homo sapiens 1.60 0.15 39 Aminopeptidase Methionine Aminopeptidase
37 1XTY A a/b Pyrococcus abyssi 1.80 1Q7S A a/b Homo sapiens 2.00 0.20 48 Hydrolase Peptidyl-Trna Hydrolase
38 1B33 A mainly a M. laminosus 2.30 1XG0 C mainly a Rhodomonas 0.97 1.33 32 Photosynthesis Allophycocianin
39 1BXB A a/b Thermus aquaticus 2.20 1MUW A a/b Streptomyces olivochromogenes 0.86 1.34 58 Isomerase Xilose Isomerase
40 1EE8 A mainly a Thermus thermophilus 1.90 1TDZ A mainly a Lactococcus lactis 1.80 0.10 35 Dna Binding Protein Fpg Protein
41 1GD7 A mainly b Thermus thermophilus 2.00 1PXF A mainly b Escherichia coli 1.87 0.13 34 Rna Binding Protein Csaa Protein
42 1J09 A a/b Thermus thermophilus 1.80 1NZJ A a/b Escherichia coli 1.50 0.30 33 Ligase Glutamil-Trna Synthase
43 1J3N A a/b Thermus thermophilus 2.00 1E5M A a/b Synechocystis sp. 1.54 0.46 55 Transferase Acyl Carrier Protein
44 1JBO A mainly a T. elongatus 1.45 1B8D A mainly a Griffithsia monilis 1.90 0.45 38 Photosynthesis Phycocyanin
45 1MNG A mainly a Thermus thermophilus 1.80 1GV3 A mainly a Anabaena sp. 2.00 0.20 59 Oxidoreductase Superoxide Dismutase
46 1SRV A a/b Thermus thermophilus 1.70 1KID 0 a/b Escherichia coli 1.70 0.00 69 Chaperone Groel
47 1UKW A mainly a Thermus thermophilus 2.40 1RX0 A mainly a Homo sapiens 1.77 0.63 39 Oxidoreductase Acil-Coa Dehydrogenase
48 1UZB A a/b Thermus thermophilus 1.40 1O0A A a/b Halobacterium salinarum 1.42 0.02 34 Oxidoreductase 1-Pyrroline-5-Carboxylate Dehydrogenase
49 1V6S A a/b Thermus thermophilus 1.50 16PK 0 a/b Trypanosoma brucei 1.60 0.10 44 Transferase Phosphoglycerate Kinase
50 1V8F A a/b Thermus thermophilus 1.90 1N2E A a/b Mycobacterium tuberculosis 1.60 0.30 55 Ligase Pantothenate Synthetase
51 1V8G A a/b Thermus thermophilus 2.10 1VQU A a/b Nostoc sp. 1.85 0.25 42 Transferase Anthranilate Phosphoribosyltransferase
52 1VC2 A a/b Thermus thermophilus 2.60 1GAD O a/b Escherichia coli 1.80 0.80 51 Oxidoreductase Glyceraldehyde 3 Phosphate Dehydrogenase
53 1VC4 A a/b Thermus thermophilus 1.80 1PII 0 a/b Escherichia coli 2.00 0.20 37 Lyase Indole-3-Glycerolphosphate Synthase
54 1VCD A a/b Thermus thermophilus 1.70 1SJY A a/b Deinococcus radiodurans 1.39 0.31 34 Hydrolase Ap6a Hydroxylase Ndx1
55 1WXD A a/b Thermus thermophilus 2.10 1NYT A a/b Escherichia coli 1.50 0.60 36 Oxidoreductase Shikimate 5-Dehydrogenase
56 1XAA 0 a/b Thermus thermophilus 2.10 1CNZ A a/b Salmonella typhimurium 1.76 0.34 52 Oxidoreductase 3-Isopropylmalate Dehydrogenase
57 1YYA A mainly b Thermus thermophilus 1.60 1MO0 A mainly b Caenorhabditis elegans 1.70 0.10 44 Isomerase Triosephosphate Isomerase
58 1YKF A a/b T. brockii 2.50 1JQB A a/b Clostridium beijerinckii 0.53 1.97 77 Oxidoreductase Nadp-Dependent Alcohol Dehydrogenase
59 2PRD 0 a/b Thermus thermophilus 2.00 1SXV A a/b Mycobacterium tuberculosis 1.30 0.70 52 Hydrolase Inorganic Pyrophosphatase