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Figure 5 | BMC Structural Biology

Figure 5

From: Prediction of structural stability of short beta-hairpin peptides by molecular dynamics and knowledge-based potentials

Figure 5

Four trajectory simulations of the peptide bhp HV. The root mean square deviation of all the peptide atoms from the initial structure (RMSDall-atoms) is plotted over time for four representative simulation runs. Six more runs were performed but their trajectories were omitted for clarity. The black line represents the median RMSDall-atoms of all ten trajectories.

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