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Table 1 Ranking of the poses of references inhibitory molecules (1i-8i and 11i-12i) in the target NF-kappaB p50 both as dimer (p50-p50) and as monomers (p50 A and B).

From: Docking of molecules identified in bioactive medicinal plants extracts into the p50 NF-kappaB transcription factor: correlation with inhibition of NF-kappaB/DNA interactions and inhibitory effects on IL-8 gene expression

Docking protocol 1
p50-p50 p50 (A) p50 (B)
Cpd. G-Score Cpd. G-Score Cpd G-Score
8i -5.88 8i -6.06 1i -6.08
7i -5.88 7i -5.83 3i -5.35
2i -5.84 11i -5.20 7i -5.06
3i -5.78 1i -5.07 2i -4.58
11i -3.87 2i -2.79 11i -3.59
1i -3.57 3i -2.77 4i -1.82
4i -0.76 4i > 0 8i > 0
12i > 0 12i > 0 12i > 0
5i - 5i > 0 5i -
6i - 6i > 0 6i -