Figure 5
From: Quantifying information transfer by protein domains: Analysis of the Fyn SH2 domain structure
Expanding the cluster of highly coupled residues. As the cut-off for the clustering algorithm is decreased, more an more residues become involved, creating a pathway that connects the binding area with the linkers of the SH2 domain. Cutoffs for panel A, B C and D are respectively 1.1 bits, 0.9 bits, 0.7 bits and 0.5 bits. All molecular graphics created with YASARA http://www.yasara.org and PovRay http://www.povray.org.