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Figure 5 | BMC Structural Biology

Figure 5

From: Protein Functional Surfaces: Global Shape Matching and Local Spatial Alignments of Ligand Binding Sites

Figure 5

The SurfaceScreen methodology uses the SSS algorithm to rapidly pre-classify surfaces based on shape complimentarity. Similarly shaped surfaces are then spatially aligned using the SurfaceAlign algorithm and scored. While the GPSS library also contains surfaces from DNA, metal and peptide binding surfaces, in this study, only ligand binding surfaces were considered.

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BMC Structural Biology

ISSN: 1472-6807

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