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Table 1 Performance statistics for Fast DPA and original DPA using a threshold of 0.96

From: Fast dynamics perturbation analysis for prediction of protein functional sites

  Rank-1 Predictionsa Any matchb Recall ≥ 0.3c Precision ≥ 0.3d Recall ≥ 0.5c Precision ≥ 0.5d
Original 287 0.87 0.80 0.68 0.76 0.44
Fast 267 0.94 0.86 0.65 0.75 0.38
  1. a Number of proteins for which at least one DPA cluster was produced, out of 305 total.
  2. b Fraction of rank-1 predictions that have at least one overlapping residue with the binding site.
  3. c Fraction of binding sites for which the recall was at least 0.3 or 0.5.
  4. d Fraction of predictions for which the precision was at least 0.3 or 0.5.