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Table 1 Benchmark tests of the CLADIST program and the DICHOT system.

From: Development of an accurate classification system of proteins into structured and unstructured regions that uncovers novel structural domains: its application to human transcription factors

  A B C D E
Test1 3546 200 1303 194 92.4%
Test2 3573 173 994 503 86.1%
Test3 3673 73 1448 49 97.7%
  1. A: Number of correctly assigned residues in structural domains
  2. B: Number of incorrectly assigned residues in structural domains
  3. C: Number of correctly assigned residues in ID regions
  4. D: Number of incorrectly assigned residues in ID regions
  5. E: Percentage of correctly assigned residues given by 100 × (A + C)/(A + B + C + D)
  6. Test1: CLADIST under standard conditions (using homologues with e-values less than 10-3); Test2: CLADIST using homologues with e-values less than 10-100; Test3, The DICHOT system