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Table 11 Reconstruction from ab initio and template-based 4-class maps

From: Ab initio and template-based prediction of multi-class distance maps by two-dimensional recursive neural networks

Maps

RMSD

TM-score

M AI

14.60

0.27

M TE

9.46

0.51

  1. Reconstruction algorithm results for models derived from multi-class predicted contact maps with (M TE ) and without (M AI ) allowing homology information. Note that, since no templates are allowed that show a sequence identity greater than 95% to the query, the M TE results are based on a mixture of good, bad and no templates (see Figure 6 for a sample distribution of template quality). The reported values are the average over the 10 runs of simulated annealing.