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Table 21 Performance measures of SVM late integration for S2783 data set with reject option.

From: Machine learning integration for predicting the effect of single amino acid substitutions on protein stability

  

cv

test

λ

α

Acc.

Prec.

Recall

FP Rate

Reject

Acc.

Prec.

Recall

FP Rate

Reject

2

1

0.829

0.792

0.606

0.072

0.000

0.831

0.787

0.617

0.074

0.000

2

2

0.833

0.806

0.597

0.064

0.012

0.836

0.804

0.609

0.065

0.013

2

5

0.838

0.825

0.581

0.054

0.031

0.840

0.820

0.594

0.056

0.030

5

1

0.839

0.812

0.609

0.062

0.032

0.841

0.808

0.621

0.064

0.035

5

2

0.842

0.825

0.595

0.055

0.048

0.844

0.820

0.610

0.057

0.049

5

5

0.847

0.845

0.566

0.043

0.073

0.849

0.844

0.582

0.045

0.076

10

1

0.849

0.825

0.618

0.056

0.072

0.851

0.820

0.634

0.058

0.075

10

2

0.852

0.837

0.599

0.048

0.089

0.856

0.837

0.617

0.049

0.094

10

5

0.859

0.836

0.492

0.027

0.147

0.861

0.866

0.507

0.029

0.154