Skip to main content

Table 23 Performance measures of SVM intermediate integration (TO*) for S2783 data set with reject option.

From: Machine learning integration for predicting the effect of single amino acid substitutions on protein stability

  

cv

test

λ

α

Acc.

Prec.

Recall

FP Rate

Reject

Acc.

Prec.

Recall

FP Rate

Reject

2

1

0.807

0.712

0.632

0.116

0.000

0.802

0.693

0.636

0.124

0.000

2

2

0.823

0.755

0.598

0.083

0.051

0.822

0.749

0.603

0.086

0.055

2

5

0.836

0.802

0.540

0.053

0.108

0.837

0.804

0.548

0.052

0.112

5

1

0.851

0.769

0.678

0.082

0.165

0.849

0.765

0.679

0.084

0.168

5

2

0.862

0.802

0.636

0.058

0.207

0.862

0.804

0.639

0.058

0.211

5

5

0.874

0.725

0.357

0.022

0.309

0.872

0.796

0.351

0.021

0.318

10

1

0.878

0.802

0.717

0.066

0.300

0.879

0.804

0.728

0.065

0.308

10

2

0.891

0.787

0.550

0.034

0.372

0.892

0.813

0.562

0.034

0.383

10

5

0.898

0.399

0.224

0.013

0.436

0.899

0.579

0.244

0.012

0.445