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Table 23 Performance measures of SVM intermediate integration (TO*) for S2783 data set with reject option.

From: Machine learning integration for predicting the effect of single amino acid substitutions on protein stability

   cv test
λ α Acc. Prec. Recall FP Rate Reject Acc. Prec. Recall FP Rate Reject
2 1 0.807 0.712 0.632 0.116 0.000 0.802 0.693 0.636 0.124 0.000
2 2 0.823 0.755 0.598 0.083 0.051 0.822 0.749 0.603 0.086 0.055
2 5 0.836 0.802 0.540 0.053 0.108 0.837 0.804 0.548 0.052 0.112
5 1 0.851 0.769 0.678 0.082 0.165 0.849 0.765 0.679 0.084 0.168
5 2 0.862 0.802 0.636 0.058 0.207 0.862 0.804 0.639 0.058 0.211
5 5 0.874 0.725 0.357 0.022 0.309 0.872 0.796 0.351 0.021 0.318
10 1 0.878 0.802 0.717 0.066 0.300 0.879 0.804 0.728 0.065 0.308
10 2 0.891 0.787 0.550 0.034 0.372 0.892 0.813 0.562 0.034 0.383
10 5 0.898 0.399 0.224 0.013 0.436 0.899 0.579 0.244 0.012 0.445