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Table 2 Proteome-wide TIM-barrel protein identification in B. subtilis

From: TIM-Finder: A new method for identifying TIM-barrel proteins

 

Identified TIM-barrel proteins in B. subtilis

 

TIM-Finder

Fugue

PSI-BLAST

99% confidencea

194/3,575 = 5.4%

184/3,575 = 5.1%

164/3,575 = 4.6%

95% confidenceb

294/3,575 = 8.2%

280/3,575 = 7.8%

250/3,575 = 7.0%

  1. aA 99% confidence level means a FPR rate ≤ 1% (i.e., Specificity = 99%). bA 95% confidence level means a FPR rate ≤ 5% (i.e., Specificity = 95%).