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Table 5 Performance of the different scoring function for predicting the native structure among the best near-native structures submitted in CASP7

From: Discriminating the native structure from decoys using scoring functions based on the residue packing in globular proteins

  

% of the native structureb

Method a

Z nat

Rank1

Rank10

Modcheck

1.99

49.47

72.63

RAPDF

-2.09

57.89

81.05

DFIRE

-1.25

62.11

75.79

ProQ

1.51

9.47

33.68

ProQ_SSE

1.76

14.74

44.21

FRST

-2.41

58.95

75.79

QMEAN3

-2.27

62.11

78.95

Rp

1.69

53.52

91.55

Rs

2.17

71.83

98.59

  1. Znat corresponds to the average Z-score of the native structure.
  2. a Except the last two functions, the performance of others are based on the data provided in Table 6 of [22].
  3. b % of the native structure with rank 1 or within rank 10 from among all the solutions submitted in CASP7.