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Table 5 Performance of the different scoring function for predicting the native structure among the best near-native structures submitted in CASP7

From: Discriminating the native structure from decoys using scoring functions based on the residue packing in globular proteins

   % of the native structureb
Method a Z nat Rank1 Rank10
Modcheck 1.99 49.47 72.63
RAPDF -2.09 57.89 81.05
DFIRE -1.25 62.11 75.79
ProQ 1.51 9.47 33.68
ProQ_SSE 1.76 14.74 44.21
FRST -2.41 58.95 75.79
QMEAN3 -2.27 62.11 78.95
Rp 1.69 53.52 91.55
Rs 2.17 71.83 98.59
  1. Znat corresponds to the average Z-score of the native structure.
  2. a Except the last two functions, the performance of others are based on the data provided in Table 6 of [22].
  3. b % of the native structure with rank 1 or within rank 10 from among all the solutions submitted in CASP7.