|
Salt bridge
|
Marker
|
Function
|
NIP7-ABY
|
NIP7-FUR
|
|---|
| | | |
S
T
|
F (T)
|
S
p
|
F (P)
|
S
T
|
F (T)
|
S
p
|
F (P)
|
|---|
|
10-4
|
All
|
α1-α1
|
0.94
|
2.74
|
1.04
|
0.83
|
0.99
|
1
|
1.01
|
1
|
|
75-37
|
All
|
β6-β4
|
1.06
|
0.52
|
1.11
|
0.91
|
0.99
|
1.89
|
1.00
|
0.36
|
|
37-10
|
All
|
β4-α1
|
1.04
|
0.16
|
1.14
|
0.99
|
1.18
|
2.87
|
0.88
|
4.68
|
|
148-109
|
All
|
RNA binding - RNA binding
|
0.95
|
0.40
|
1.09
|
0.45
|
u
|
u
|
u
|
u
|
|
33-4
|
All
|
β3-β1
|
0.92
|
0.59
|
0.94
|
0.69
|
0.98
|
0.10
|
1.00
|
0.20
|
|
20-17
|
All
|
α1-α1
|
0.92
|
2.65
|
1.02
|
0.13
|
0.89
|
2.96
|
0.98
|
0.36
|
|
16-12
|
P.a.&P.f.
|
α1-α1
|
1.14
|
3.77
|
0.91
|
1.68
|
1.08
|
1.60
|
0.89
|
2.76
|
|
147-113
|
P.a.&P.f.
|
RNA binding - RNA binding; α6
|
0.98
|
0.02
|
0.72
|
3.18
|
u
|
u
|
u
|
u
|
|
33-2
|
2p38&P.a.
|
β3 - N-terminal
|
0.98
|
0.01
|
0.99
|
2.07
|
-
|
-
|
-
|
-
|
|
131-116
|
All
|
C-terminal - β9
|
1.93
|
12.23
|
0.94
|
0.49
|
0.98
|
0.72
|
0.99
|
0.43
|
|
51-5
|
P.a.&P.f.
|
α2-β1
|
1.25
|
1.50
|
1.03
|
0.03
|
0.88
|
1.11
|
1.18
|
0.74
|
|
76-70
|
P.a.&P.f.
|
β6 - N-terminal
|
1.20
|
6.59
|
0.84
|
3.42
|
0.83
|
8.19
|
0.95
|
1.98
|
|
147-146
|
P.a.
|
RNA binding - C-terminal
|
1.84
|
4.12
|
0.95
|
0.12
|
-
|
-
|
-
|
-
|
|
48-45
|
P.a.&P.f.
|
α2-α2
|
1.06
|
0.14
|
0.92
|
1.42
|
0.99
|
0.00
|
0.88
|
1.29
|
|
88-23
|
P.a.
|
β7-β2
|
1.26
|
5.91
|
0.87
|
1.72
|
-
|
-
|
-
|
-
|
|
151-109
|
All
|
RNA binding; β12 - RNA binding
|
0.93
|
0.09
|
0.75
|
1.49
|
0.86
|
2.74
|
0.92
|
0.42
|
|
119-117
|
P.a.
|
β9-β9
|
0.98
|
0.04
|
1.26
|
2.31
|
-
|
-
|
-
|
-
|
|
48-44
|
2p38&P.a.
|
α2-α2
|
0.99
|
0.00
|
0.98
|
0.01
|
-
|
-
|
-
|
-
|
|
146-112
|
All
|
C-terminal - α5
|
u
|
u
|
u
|
u
|
1.01
|
0.00
|
1.11
|
0.50
|
|
76-17
|
P.a.&P.f.
|
β6-α1
|
u
|
u
|
u
|
u
|
0.83
|
1.07
|
0.95
|
0.56
|
- Columns: residue pairs forming salt bridges; occurrence of a salt bridge in the different structures (ALL, the NIP7-ABY, the NIP7-FUR models, and the crystal 2P38:A structure; ABY & FUR for only the NIP7-ABY, NIP7-FUR models and so on); the values of the indices of sensitivity for the NIP7-ABY; for the NIP7-FUR models; the F-value for a concrete parameter. Values expressing significant changes, maintenance of a salt bridge when pressure or temperature changes are in bold. Unstable salt bridges (occurrence less than 20%) are marked with the symbol u.
