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Table 3 Kinetics and affinity constants for RGD-hirudin and mutant variant binding to thrombin

From: Structural basis of RGD-hirudin binding to thrombin: Tyr3 and five C-terminal residues are crucial for inhibiting thrombin activity

Variant analyzed

Association rate ka(M−1 s−1)

Dissociation rate kd(s−1)

Binding affinity KD(M)

RGD-hirudin

1.77 × 103

2.73 × 10−5

1.55 × 10−8

Y3A

0.80

2.88 × 10−3

3.61 × 10−3

S50A

1.12 × 103

3.94 × 10−5

3.50 × 10−8

Q53A

59.20

3.37 × 10−5

5.70 × 10−7

D55A

371.00

3.83 × 10−4

1.03 × 10−6

Q57A

155.00

3.74 × 10−4

2.41 × 10−6

I59A

73.00

1.39 × 10−3

1.90 × 10−5