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Fig. 5 | BMC Structural Biology

Fig. 5

From: Predicted binding site information improves model ranking in protein docking using experimental and computer-generated target structures

Fig. 5

Performance of eRankPPI, ZDOCK and ZRANK on the BM1755 dataset. Ranking accuracy is assessed by the percentage of successful cases based on a, e, i iRMSD and b, f, j PCS, c, g, k the hit count, and d, h, l the success rate. Each algorithm is evaluated against a-d experimental structures, as well as e-h high-quality and i-l moderate-quality protein models. Black dashed lines shown for the percentage of successful cases correspond to the upper bound estimated by taking the best of all 2000 models constructed for each target

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