BMC Structural Biology

Table 2 Comparison of the success rates for different scoring functions against high- and moderate-quality protein models

From: Predicted binding site information improves model ranking in protein docking using experimental and computer-generated target structures

Dataset	Scoring function	Success rate [%]
BM1755H		iRMSD = 8.5 Å	PCS = 0.30
	eRank^PPI	42.71	38.23
	ZDOCK	27.61	22.05
	ZRANK	22.55	18.17
BM1755M		iRMSD = 9.5 Å	PCS = 0.25
	eRank^PPI	42.31	20.68
	ZDOCK	26.99	18.16
	ZRANK	24.60	17.24

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ISSN: 1472-6807

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